Gene Paes_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0260 
Symbol 
ID6460417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp269510 
End bp270826 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content50% 
IMG OID642724251 
Productthreonine synthase 
Protein accessionYP_002014964 
Protein GI194333104 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0450617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACT ACAGTACCAA TAAATCTTCG ACACCGGCAA GCCTCAAAAG AGCGACGCTT 
GAGGGTCTAG CCCCCGATGG CGGCCTCTAT GTCCCGTCTG CCATACCGGT TTTCTCTCCC
TCGGAGATCG AACTGCTCAA AGAAGCTCCG TTTAAGGATA TTGCCTTTGC CATAGCAAAA
AAATATACCG GAAGTGAAAT TCCCCCTGAC CGTCTCTACG AGATCATTGA AGAGTGCTTC
AATTTCCCAA CCCCACTGGT ACCTCTCGAC AACAACACGT TTATCGAGGA ACTCTTCCAT
GGCCCCACAC TTGCGTTCAA AGACTACGGT GCACGTTTTC TGGCCAGAAT GACCGGTTAT
TTCGCAGAGG AAGATCATAC ACTCATTACC ATCCTCGTAG CGACTTCCGG AGACACGGGT
AGCGCTGTAG CCTACGGATT TCAGGGTATT CCCAATACAC GGGTCGTCCT GCTCTATCCA
TCCGGAAAAG TCAGCCGCCT TCAGGAACAG CAGCTGACAA CCGCAGGAGG AAACGTCACA
GCACTTGAGG TCAAAGGTGA TTTTGATGAT TGTCAAAGGC TTGTCAAACA AGCATTTATG
GACGGATCGA TCAAGCAGAA TCTCACCCTG ACATCGGCAA ACTCCATCAA TATATCGCGT
CTCATCCCCC AGTCGTTCTA CTATGCATGG GCAGCGCTGC AACTCGACAG AAAGTATCCG
GGGAAAAAAG CTGTCTTCTC GGTTCCGAGC GGAAACTACG GCAACCTTAC CGCTGGCGTA
CTGGCAAAAA TGATGGGATT CCCGATCGAT CACTTTATTG CAGCCTCCAA TGCAAACGAC
AGCGTTACAC GCTATATTGA AGAGGGACGC TATGAGCCTC ATCCGACAAT CCGTACACTG
TCGACGGCAA TGGATGTCGG CGATCCAAGC AATTTCGCCC GCCTGCGCCA CATCTATGCC
AATGATCACA CGAAAATGGC TGCAGATATT ACAGGCTACT CGATCTCGGA CAACGAAACG
CTCGAAACCA TCAGAAGCGT CTACGACCGT TTCGGCTATA TCATGGATCC GCATACCGCT
GTCGGCAGCA GGGCTCTTGA ACTCTGGAGA GAGCAGATGA CGCAAGCCGA TTCCAACCCG
GCTGTCGTAC TGTCGACAGC GCATCCGGCA AAATTCCTTG AATCGATCCG TGAAGCGCTC
GATATGGAGA TATCCATCCC TGACAGATTG CAGACCGTTC TGGATAAACA GAAAATAGCA
ACCCTGATCG GTTCCGACTA CAATGAACTC TCAGCGTTTC TTTCTGCACT CGATTAA
 
Protein sequence
MIYYSTNKSS TPASLKRATL EGLAPDGGLY VPSAIPVFSP SEIELLKEAP FKDIAFAIAK 
KYTGSEIPPD RLYEIIEECF NFPTPLVPLD NNTFIEELFH GPTLAFKDYG ARFLARMTGY
FAEEDHTLIT ILVATSGDTG SAVAYGFQGI PNTRVVLLYP SGKVSRLQEQ QLTTAGGNVT
ALEVKGDFDD CQRLVKQAFM DGSIKQNLTL TSANSINISR LIPQSFYYAW AALQLDRKYP
GKKAVFSVPS GNYGNLTAGV LAKMMGFPID HFIAASNAND SVTRYIEEGR YEPHPTIRTL
STAMDVGDPS NFARLRHIYA NDHTKMAADI TGYSISDNET LETIRSVYDR FGYIMDPHTA
VGSRALELWR EQMTQADSNP AVVLSTAHPA KFLESIREAL DMEISIPDRL QTVLDKQKIA
TLIGSDYNEL SAFLSALD