Gene Paes_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0246 
Symbol 
ID6460644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp255827 
End bp256468 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID642724237 
Productbeta-lactamase domain protein 
Protein accessionYP_002014950 
Protein GI194333090 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.517367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGA AACAGTTCCG AACCGGAGGG GATAGAAATT TCGGTTACCT TGCCGCTGAT 
GAAACAAGTC GTCTTGCGGT GGCTGTCGAT ACCTCTTATA ATCCGGGGAT GATTGTCGAG
GATGCGCGTA GGGAGGGGTT GACTATCCGT TACCTCTTTT CTACCCATAG TCACCATGAT
CATACGAATG GTAATGAAGA GGCCGCTCGT CTGACCGGTT GCACTCCGTT GCTCTATGGA
TCGCTTTGTC CTGTAAGCGG TGTTCGTATC GAGGATGGTG CAGAGCTGCC TCTTGGCGCT
CTTCAGGTCA AGGTGCTTTA CACTCCCGGC CACACTGATG ATTCGATATG TCTCTGTGTA
GGCGACGTCG TCTTTACCGG TGATACGCTT TTTGTCGGCA AGGTTGGCGG GACGGACCTT
GCTGAACAGG CGGTGACGGA GTTTGGCTCA CTCCATGAGA AACTTCTTTC CCTTCCAGAG
ACGACTCGTG TTTTTCCCGG TCATGATTAC GGCGTTGCGC CGGAATCGAC TATCGGGCAC
GAACGGCGTA CAAACCCCTT TCTTCTTCAG CCCGACCTTG AATCCTTTAT CGGCTTGAAG
CGCAACTGGG CGGCGTATAA AAAGGCTCAC GGGATTGCCT GA
 
Protein sequence
MYLKQFRTGG DRNFGYLAAD ETSRLAVAVD TSYNPGMIVE DARREGLTIR YLFSTHSHHD 
HTNGNEEAAR LTGCTPLLYG SLCPVSGVRI EDGAELPLGA LQVKVLYTPG HTDDSICLCV
GDVVFTGDTL FVGKVGGTDL AEQAVTEFGS LHEKLLSLPE TTRVFPGHDY GVAPESTIGH
ERRTNPFLLQ PDLESFIGLK RNWAAYKKAH GIA