Gene Paes_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0234 
Symbol 
ID6459197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp245148 
End bp246107 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content51% 
IMG OID642724225 
ProductNucleotidyl transferase 
Protein accessionYP_002014938 
Protein GI194333078 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT TCGTTCTCGC TGCCGGCTTC GGAACACGAC TCAGACCGCT GACCGTCAGC 
ATACCCAAAC CACTGATACC CGTCCTGAAC ATTCCCTCGC TGTGCTACAC GCTCTTCCTT
CTCAAAGAAG CGGGCATCAG GGACATCGTC TGCAACCTGC ACTATCATGC AGATGCCATC
GTCAGATATC TCGAAGAGCA GGATTTTTTC GGCATGAATA TCATGATCTC GGAGGAAAAA
GAGATCCTCG GTACCGGAGG AGGTCTGAAA AAATGCGAAT CATTGCTCAA GGATGATGAT
TTTGTCCTGA TCAACAGCGA TATTATTACT GATATCAGCC TCGATGCGCT CATCAAGGCC
TACCGCAGGA GCGACGCGTC AGGAGTACTC ATGCTTCATG AAACCCCCCA GGCTGGAGCT
ATTGGCCATA TTGGTGTTCA GAACGGAATG GTCAAGGATT TCAGGAACAT GCGAAGAACG
GAACTCCGAT CAGACCTTAT TTATACAGGA ACCGCCGTTC TCAGCCCGGA TATCTTCAAT
CATCTGCAAA CAGGGTTTTC AAGCATTGTC GACACGGGCT TTACAGGCCT TATCGATAAC
GGCGGGGTGG CATCATATGT ACATGACGGA CTCTGGCAGG ATATCGGTAC ACTTGAAGAG
TACCTCTACA GCTCAACACA CAAAAACAGA CCGGTTCTGG AGCTTGGCAA CCGTATGCAG
AACGCTCTCG GAATCAGGCC GCATATGCTT GCCGACGATG CCCGAATCAG TCCGGAAGCA
ACCGTTACAT CATCGGTTAT CGGTAAAGGT TGCCAGGTCG GCCCTGGCGC AATCATAGAG
AACGCTCTAC TCCTGCCCGG CGTCTCGATC GATGAACGAC AGATCGTCAG CAACAGCATC
GTCTATACAG AAGGAATCAT TACTCTCAAC CAGGTAATCA CGGAGAACCC CGGCTCATGA
 
Protein sequence
MKAFVLAAGF GTRLRPLTVS IPKPLIPVLN IPSLCYTLFL LKEAGIRDIV CNLHYHADAI 
VRYLEEQDFF GMNIMISEEK EILGTGGGLK KCESLLKDDD FVLINSDIIT DISLDALIKA
YRRSDASGVL MLHETPQAGA IGHIGVQNGM VKDFRNMRRT ELRSDLIYTG TAVLSPDIFN
HLQTGFSSIV DTGFTGLIDN GGVASYVHDG LWQDIGTLEE YLYSSTHKNR PVLELGNRMQ
NALGIRPHML ADDARISPEA TVTSSVIGKG CQVGPGAIIE NALLLPGVSI DERQIVSNSI
VYTEGIITLN QVITENPGS