Gene Paes_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0220 
Symbol 
ID6460293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp231702 
End bp232193 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID642724211 
Productrare lipoprotein A 
Protein accessionYP_002014924 
Protein GI194333064 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.602975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCA TGCTTGCACA GCTGACAGGC TGCCAGACAA GCTCAACATA TACATCGCTG 
CAATCAGGCA TTCCCGTCAC AGGCCTCAGT CCCGCCTGCG ACCAAACCCC TGACCCTAAG
GACAATGAGC TTTCATGCGA TGAGAACGCC GAAGACCTCG GGACCCTCTG TATGGTCATT
GAAGGCAAAG CCTCATACTA TGCCGACAGA TTTCACGGAC GTCTTACCGC CAACGGCGAA
CGATTTAATA TGCATGAGAT GACCGCTGCA CATAAATCAC TCCCGTTCGG CTCGATGGTC
AGGGTTACGA ACCTCACCAA CGGAAAAAAA GTAGTTGTCA GAATAAACGA CAGAGGCCCT
TACATCAAAG GTAGAATTAT CGACCTCTCA AAGGGCGCAG CAAAAGAGAT CGGCCTCATC
AAAAAAGGGG TCAGCAAAGT GAAGCTTGAA GTCTATGACG GCAGCGATAC CGGTGAGTCG
CAGACATCAT AA
 
Protein sequence
MVIMLAQLTG CQTSSTYTSL QSGIPVTGLS PACDQTPDPK DNELSCDENA EDLGTLCMVI 
EGKASYYADR FHGRLTANGE RFNMHEMTAA HKSLPFGSMV RVTNLTNGKK VVVRINDRGP
YIKGRIIDLS KGAAKEIGLI KKGVSKVKLE VYDGSDTGES QTS