Gene Paes_0161 details

Gene Information

• Locus tag: Paes_0161
• Symbol: rplI
• ID: 6459161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prosthecochloris aestuarii DSM 271
• Kingdom: Bacteria
• Replicon accession: NC_011059
• Strand: +
• Start bp: 169540
• End bp: 169986
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642724153
• Product: 50S ribosomal protein L9
• Protein accession: YP_002014867
• Protein GI: 194333007
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000000723092
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAAGTCA TTTTAAGAAA AAATGTGGCC TCTCTGGGTG ATGCAGGTGA AGTCGTTGAC 
GTGAAAAACG GCTACGCGAA TAACTACCTC ATCCCGCAGG GAATGGCAGC CAGAGCAACA 
GACGGTGCCC TGAAAGCACT TGAAACGGAA AGAAAACAGC AGGCAAGAAA GATCGAGCAG 
CAGAGAGTCG CTGCCCGTGC GATAGCCGAA AAGATTCAGC AGATGACCCT TAAGGTGCCG 
GCCAGGGCAG GGGAATCCGG CAAACTGTTC GGAACCGTCA CATCGGTCAA TATCGCTGAT 
GCACTCAAAG TCGAAGGGGT CGATGTTGAT CGCCGTAAAA TCACCCTCGA TGCTCCTATC 
AGAGCTCTTG GCAATTACGA GGCAGAAGTC AAACTCTTCA TGGATGTTTC GGCGACGATC 
AAAGTTACTG TTGAAGCCGA AGGGTAA 

 

Protein sequence

MKVILRKNVA SLGDAGEVVD VKNGYANNYL IPQGMAARAT DGALKALETE RKQQARKIEQ 
QRVAARAIAE KIQQMTLKVP ARAGESGKLF GTVTSVNIAD ALKVEGVDVD RRKITLDAPI 
RALGNYEAEV KLFMDVSATI KVTVEAEG