Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0120 |
Symbol | |
ID | 6458454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 124185 |
End bp | 125546 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642724107 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_002014827 |
Protein GI | 194332967 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTT TGAGTACGAC GTTTTATTTC ATCATTGCCA TTTTCATTCT TGTCACCGTG CATGAGCTCG GTCACTTTCT GACAGCCAAG CTTTTTGGTA TGCGGGTCGA CAAGTTTTAT ATCGGCTTCG ACTTCTACAA CCTGCGCTTC TGGAAAAAAC AGATCGGCGA AACAGAATAC GGTATCGGCG TGTTTCCGCT CGGCGGTTAT GTCAAGATCG CCGGCATGGT CGATGAAAGC CTTGACACCG ATTTTCAGGA AAAAGATCCG GAACCATGGG AGTTCCGCGC AAAACCGGTC TGGCAGCGCC TGATCGTACT CGCCGGCGGT GTTGTTATGA ACATGGTACT TGCTGCCGCG ATCTTTATCG GTATGGCCTC TGTTTTCGGC GAAAGCAGGA CATCGACCCT CAACCCCGCC TATGTAGCAA AGGGTTCGGT CTATGAGGCA ATGGGCATGC AGACGGGCGA CAGGTTTGTA AGCGTCAACG GCAAACAGGT TTCCTACTGG GAAGACGTCC TTGCTCCCGA AACATTTGCC GCAGGAAGTC TGCAGTACGT TGTCAGGCGA AACGGGACGA ACATCACCAT ACCGGCGCCT CAGGACATTC TTACCCGCAT TAATGACAGC CAGGCCCTCG GCATCCGTCC GCTCATGCCT CCGGTCATCG ACCAGGTACT TGAAAACCAG CCGGCAGCCG AAGCCGGACT GAAGCCTGGA GCGCTCATCA CGGCAATCGA CGCCACACCG GTCAATGACT GGTCAGAGGT TGTCGCTCTG ATTTCAGAAA ACCCGGGAAA ACAGATTACC GTCAACTGGA AATATCTCGA TCCAGCCGCA GACGGCACGG TCAATGTCGA CAAGATCCGT CAGTCAGGCA TTGCCGAAAG CGCTGAGGTC ATCCCGTCGG ATATGGGCAG GATCGGCATC GCGCTCAAGC AGACACTATC TATCGATCAC AGAAAACTCA ACCCTGTCGA AGCGACGTTT TATGGCATCG AACAGACCTG GAAAATGACA AGTACAACAG TCATGGGATT CGGCAAAATC CTGACCGGTA AAGAAGACTT CCGCAAATCC ATGGGTGGAC CGATCAAGAT CGCCAGAATT GCCAACCAGA GCGCCGAGCA GGGCATAAGC AGCTTTCTCT ACTTTGTCGC ACTGCTCTCG ATCTCGCTCG CATTCATCAA TATTCTGCCT ATTCCGGCGC TTGACGGAGG ACAATTTGTC ATGAACGCAG TCGAAGGGGT CATGGGACGG GAGATCCCCA TTACAATCAA AATGCGAATA CAGCAAGTCG GCATGGCACT CTTACTGACG CTCTTCATGT TCTTCATCAT TAATGATATC ATTAACCCTT AA
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Protein sequence | MDFLSTTFYF IIAIFILVTV HELGHFLTAK LFGMRVDKFY IGFDFYNLRF WKKQIGETEY GIGVFPLGGY VKIAGMVDES LDTDFQEKDP EPWEFRAKPV WQRLIVLAGG VVMNMVLAAA IFIGMASVFG ESRTSTLNPA YVAKGSVYEA MGMQTGDRFV SVNGKQVSYW EDVLAPETFA AGSLQYVVRR NGTNITIPAP QDILTRINDS QALGIRPLMP PVIDQVLENQ PAAEAGLKPG ALITAIDATP VNDWSEVVAL ISENPGKQIT VNWKYLDPAA DGTVNVDKIR QSGIAESAEV IPSDMGRIGI ALKQTLSIDH RKLNPVEATF YGIEQTWKMT STTVMGFGKI LTGKEDFRKS MGGPIKIARI ANQSAEQGIS SFLYFVALLS ISLAFINILP IPALDGGQFV MNAVEGVMGR EIPITIKMRI QQVGMALLLT LFMFFIINDI INP
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