Gene Paes_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0120 
Symbol 
ID6458454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp124185 
End bp125546 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content52% 
IMG OID642724107 
Productmembrane-associated zinc metalloprotease 
Protein accessionYP_002014827 
Protein GI194332967 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT TGAGTACGAC GTTTTATTTC ATCATTGCCA TTTTCATTCT TGTCACCGTG 
CATGAGCTCG GTCACTTTCT GACAGCCAAG CTTTTTGGTA TGCGGGTCGA CAAGTTTTAT
ATCGGCTTCG ACTTCTACAA CCTGCGCTTC TGGAAAAAAC AGATCGGCGA AACAGAATAC
GGTATCGGCG TGTTTCCGCT CGGCGGTTAT GTCAAGATCG CCGGCATGGT CGATGAAAGC
CTTGACACCG ATTTTCAGGA AAAAGATCCG GAACCATGGG AGTTCCGCGC AAAACCGGTC
TGGCAGCGCC TGATCGTACT CGCCGGCGGT GTTGTTATGA ACATGGTACT TGCTGCCGCG
ATCTTTATCG GTATGGCCTC TGTTTTCGGC GAAAGCAGGA CATCGACCCT CAACCCCGCC
TATGTAGCAA AGGGTTCGGT CTATGAGGCA ATGGGCATGC AGACGGGCGA CAGGTTTGTA
AGCGTCAACG GCAAACAGGT TTCCTACTGG GAAGACGTCC TTGCTCCCGA AACATTTGCC
GCAGGAAGTC TGCAGTACGT TGTCAGGCGA AACGGGACGA ACATCACCAT ACCGGCGCCT
CAGGACATTC TTACCCGCAT TAATGACAGC CAGGCCCTCG GCATCCGTCC GCTCATGCCT
CCGGTCATCG ACCAGGTACT TGAAAACCAG CCGGCAGCCG AAGCCGGACT GAAGCCTGGA
GCGCTCATCA CGGCAATCGA CGCCACACCG GTCAATGACT GGTCAGAGGT TGTCGCTCTG
ATTTCAGAAA ACCCGGGAAA ACAGATTACC GTCAACTGGA AATATCTCGA TCCAGCCGCA
GACGGCACGG TCAATGTCGA CAAGATCCGT CAGTCAGGCA TTGCCGAAAG CGCTGAGGTC
ATCCCGTCGG ATATGGGCAG GATCGGCATC GCGCTCAAGC AGACACTATC TATCGATCAC
AGAAAACTCA ACCCTGTCGA AGCGACGTTT TATGGCATCG AACAGACCTG GAAAATGACA
AGTACAACAG TCATGGGATT CGGCAAAATC CTGACCGGTA AAGAAGACTT CCGCAAATCC
ATGGGTGGAC CGATCAAGAT CGCCAGAATT GCCAACCAGA GCGCCGAGCA GGGCATAAGC
AGCTTTCTCT ACTTTGTCGC ACTGCTCTCG ATCTCGCTCG CATTCATCAA TATTCTGCCT
ATTCCGGCGC TTGACGGAGG ACAATTTGTC ATGAACGCAG TCGAAGGGGT CATGGGACGG
GAGATCCCCA TTACAATCAA AATGCGAATA CAGCAAGTCG GCATGGCACT CTTACTGACG
CTCTTCATGT TCTTCATCAT TAATGATATC ATTAACCCTT AA
 
Protein sequence
MDFLSTTFYF IIAIFILVTV HELGHFLTAK LFGMRVDKFY IGFDFYNLRF WKKQIGETEY 
GIGVFPLGGY VKIAGMVDES LDTDFQEKDP EPWEFRAKPV WQRLIVLAGG VVMNMVLAAA
IFIGMASVFG ESRTSTLNPA YVAKGSVYEA MGMQTGDRFV SVNGKQVSYW EDVLAPETFA
AGSLQYVVRR NGTNITIPAP QDILTRINDS QALGIRPLMP PVIDQVLENQ PAAEAGLKPG
ALITAIDATP VNDWSEVVAL ISENPGKQIT VNWKYLDPAA DGTVNVDKIR QSGIAESAEV
IPSDMGRIGI ALKQTLSIDH RKLNPVEATF YGIEQTWKMT STTVMGFGKI LTGKEDFRKS
MGGPIKIARI ANQSAEQGIS SFLYFVALLS ISLAFINILP IPALDGGQFV MNAVEGVMGR
EIPITIKMRI QQVGMALLLT LFMFFIINDI INP