Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0104 |
Symbol | |
ID | 6458551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 103392 |
End bp | 105353 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642724091 |
Product | alpha amylase catalytic region |
Protein accession | YP_002014811 |
Protein GI | 194332951 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAGC AGAGCAATGA GCACCATACC ATCGAAAGAC GCCTCGATCA GATAGATCTC AACGAGCTTT GCCGCGGCAG AAGCTTTCAC CCGTCGCCCG TATCGTGGGG TGACGAAGTC CTCTATTTCC TGTTTCTCGA CCGGTTCTCG GACGCAAAAG AGTACGGAGG ATTCACCGAC CGGGAAGGCA GGCCTGTCGA TAGCGGTGAA AACGGACGTT CGACGCCGCT CTTCAACTTC GAAGATGATG CTGCTCGCGC ATCGAGGAGT GAATGGTTCG AATCAGGAAA AGGATGGTGC GGCGGCACTC TTGCGGGTCT GCGTGACAAA CTTGGCTACC TGAAACGGCT TGGCATCACA GCACTGTGGA TCAGTCCCGT CTTCAAACAG GTCACCGGCA GCAACGACTA TCACGGCTAC GGCATCCAGA ACTTTCTTGA CGTTGATCCG CATTTCGGAA CCCGGCAAGA GCTCAGAGAA CTCGTGCAGG CAGCGCACGC TGAAGGCATA CGGGTCATTC TCGATATCAT CGTCAACCAC GCTGGAGACG TCTTCGCCTA TAGCGGCAAC GAAAGGCGCA ACTACAATAA CGGAGTGGAA TTTCCCGTGC AGGGGTTCCG TCGATTCAGC GGCGAAGAAG GAAGCATTCC ATTCAGGACC GTGAGCCCTG AAGAAGAGCA GGAGCTCTGG CCTGACGGAG CCGTCTGGCC TGCGGAGCTG CAAGAGCCCG GCAACTGGCG GAAAAAGGGC GAAATCGGCA ACTGGGACGG GTTTCCCGAC TATGTCGAGG GTGATTTCCT TTCGCTCAAA GACCTGCATC TCGGCAATGG GATCAGCGAC CCCTCGGCCG GTCAGGATAT CGGCAGAAGA ATCAGCGGAT TCTCTCCGTC CGAAACCCTG GCGCACCTTA TCAAGGTCTA CCGCTTCTGG ATTGCCTATG CAGACATCGA CGGCTACCGT CTCGACACCG TCAAACACAT GGAACCCGGA GCGGTCCGTC TCTTTGTCAA CGCCATTCAT GAATTCGCCC AGTCGGTCGG CAAGGAGAAC TTCACCGTTA TCGGAGAAAT CACGGGAGGA CGCGCTCTTG CCTTCGAAAC GCTTGAAACC ACCGGCCTTG ATGCAGCACT CGGCATCAAC GACGTTTCCG ACAAGCTCGA ATTTCTCGCT AAAGGGTGGC GCAGCCCCGG CCACCCCGAA ACACCTGAAC AGGAAGGCTA CTTCGATATC TTCCGCAACA GTCTCCAGGA CTGCAAGAGC AGCCATCAGT GGTATGGCAA TCATATCGTC ACCATGTTCG ACGATCACGA CCAGGTCGGC GTACGGCACA AATTCCGTTT CTGCGGACAG GGAGAACAGA GCTACACCCT GCTGCCGGCA GCACTCGGGC TCAATCTTGC GACGATGGGT ATCCCCTGCC TCTACTACGG AACCGAACAG GCCTTCAACG GCGCCGACCA CCGCGACAAC GACGACTCGT ACAGTGATGT CTTCCTGCGG GAGTGCATGT TCGGAGGAGC GTTCGGATCG ATGCAGAGCA CCGGACGCCA CTTCTTCAAC GAATCGCATG AGATCTACCG CTTCATCAGT CGCCTTTCCG CCCTGAGATC GCAACACCTT GCGCTGAGAC GGGGACGTCA GTACCTCCGG CAGGTATCAG CCTCGGGTCA TGACAACGAC TTTCACTACC CGCAGCCCCT TGGCGGCGAA CTGCGCTGGA TCATCGCATG GTCCCGCATC TTCGCAGACC GGGAGTACCT CTGTGCCTGC AATACCGACC CGCGCCACCC CCTGACGCTC TGGGCCACAG TGGACAGTTC GCTCCACCGC TCCGGCGAGA CCATGAGCTG CCTGTTCAGC TCGGACCGGG AGCAGGAAGG AACATCCTCT GACATTGAAG CACGCAACGG CAAGGCGATT GCCGTAACAG TGCCTCCGGG AGGGTTCGTG GTCTATCATT GA
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Protein sequence | MTEQSNEHHT IERRLDQIDL NELCRGRSFH PSPVSWGDEV LYFLFLDRFS DAKEYGGFTD REGRPVDSGE NGRSTPLFNF EDDAARASRS EWFESGKGWC GGTLAGLRDK LGYLKRLGIT ALWISPVFKQ VTGSNDYHGY GIQNFLDVDP HFGTRQELRE LVQAAHAEGI RVILDIIVNH AGDVFAYSGN ERRNYNNGVE FPVQGFRRFS GEEGSIPFRT VSPEEEQELW PDGAVWPAEL QEPGNWRKKG EIGNWDGFPD YVEGDFLSLK DLHLGNGISD PSAGQDIGRR ISGFSPSETL AHLIKVYRFW IAYADIDGYR LDTVKHMEPG AVRLFVNAIH EFAQSVGKEN FTVIGEITGG RALAFETLET TGLDAALGIN DVSDKLEFLA KGWRSPGHPE TPEQEGYFDI FRNSLQDCKS SHQWYGNHIV TMFDDHDQVG VRHKFRFCGQ GEQSYTLLPA ALGLNLATMG IPCLYYGTEQ AFNGADHRDN DDSYSDVFLR ECMFGGAFGS MQSTGRHFFN ESHEIYRFIS RLSALRSQHL ALRRGRQYLR QVSASGHDND FHYPQPLGGE LRWIIAWSRI FADREYLCAC NTDPRHPLTL WATVDSSLHR SGETMSCLFS SDREQEGTSS DIEARNGKAI AVTVPPGGFV VYH
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