Gene Paes_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0091 
Symbol 
ID6460728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp89837 
End bp91165 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content57% 
IMG OID642724078 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002014798 
Protein GI194332938 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC CCGTTGACGA TGTGCTGGCT AATGTCGAAG GCTATGATTC CGGGCCTGAC 
GATGGAAGTG GTTCGAGGTT GAAAACGAGT GCGCTTTCGG CTTTTCCTGC ATTTAGGAGC
CGGAATTTCC GGCTCTATTT TATCGGGCAG ATCGTTTCGA TGATCGGTAC CTGGCTGCAG
ATGGTGGCGC AGGGGTGGCT GGTGCTCGAG ATGACCGGTT CGGCTTTCTG GGTCGGCGTG
ACGGCTGCAG CATCGTCGTT GCCGACGCTG TTTTTGTCGT TGTTCGGAGG AGTGATCGTC
GACCGGTACG ACCGTCGGAC GATTCTGCTC TGGACACAGT CTGCGTCGAT GCTGCTGGCC
CTTGTGCTCG GGGTGTTTAC GCTGACGGGA ACGGTGACAC TTGCCATTAT TCTGGTGCTT
GCGTTTCTGC TTGGCTGCAT AGCAGCGGTG GCGACGCCTG CGATACAGGC ATTTCTGAGT
GAAATGGTTG ACCGCGACCA GCTGCATTCG GCCGTTGCGC TCAATTCCTC CATTTTTAAT
GCCTCACGCG TGATTGGGCC TGCAATAGCC GGGTTTATGA TCTCCTGGAT CGGGACGGGC
GGCGCGTTCA TTGCCAACGG CATGAGCTAT AGTGCGGTCA TTCTTGCCTT GCTCGGCATT
CATACCGTTT CGCAGCGCAC GAAGCCTGCT GTCGAGCTCT CTCCTCTGCA GTCCATCAGG
GAAGGCTTGC TCTATACCCG GTATCATCCT CTCATCAGGA CTATTATTCT GTTTGTGGCG
GTTGTGTCGA TTTTCGGCTG GTCGTTCATG TCGATGCTGC CGGTTGTCGC CAAACAGACC
TTCGGCCTCG GGTCGGAAGG GATGGGTTTT CTCTTTTCAG CATTCGGTCT TGGTTCGCTG
TCGGGTACTG TGCTGGTCTC GATGGCCTCT GGTCGGGTGC ATGGCGGCGT GATGGTGACC
GGAGGGATCC TTCTCTTTTC CCTTGCCTTG ACGGCGTTTA CCTTTGCACC GGAAGAAGGT
GTTGCGATGG GGTTTCTTTT TTTTGCCGGT ATCGGCCTTC TTTCAGCGTT CGCCACCATG
ACGGCCACGG TGCAGGGACT GGTGGAGGAC CGTTACCGGG GCCGGGTGAT GAGCATTTAC
CTGATGGTCC TGATGGGGTT CATGCCGATC GGTAATCTGC AGGTAGGCAT GCTTTCCGAG
CACTTCGGCA CCTCGGTTGC CATCAGGATC GGCAGCCTCA TTGTGCTTGC GGCAACGATG
GTCCTTTTCA GCTTGAGGCA TCGGATCGAA GGGGCGTGGA ACGCCTACGA GCGATCCGGG
GAACCTTGA
 
Protein sequence
MKTPVDDVLA NVEGYDSGPD DGSGSRLKTS ALSAFPAFRS RNFRLYFIGQ IVSMIGTWLQ 
MVAQGWLVLE MTGSAFWVGV TAAASSLPTL FLSLFGGVIV DRYDRRTILL WTQSASMLLA
LVLGVFTLTG TVTLAIILVL AFLLGCIAAV ATPAIQAFLS EMVDRDQLHS AVALNSSIFN
ASRVIGPAIA GFMISWIGTG GAFIANGMSY SAVILALLGI HTVSQRTKPA VELSPLQSIR
EGLLYTRYHP LIRTIILFVA VVSIFGWSFM SMLPVVAKQT FGLGSEGMGF LFSAFGLGSL
SGTVLVSMAS GRVHGGVMVT GGILLFSLAL TAFTFAPEEG VAMGFLFFAG IGLLSAFATM
TATVQGLVED RYRGRVMSIY LMVLMGFMPI GNLQVGMLSE HFGTSVAIRI GSLIVLAATM
VLFSLRHRIE GAWNAYERSG EP