| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0060 |
|---|
| Symbol | |
|---|
| ID | 6460823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 66923 |
|---|
| End bp | 68776 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642724053 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_002014773 |
|---|
| Protein GI | 194332913 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG ATACGCTACC CGCATCACCA TCAGCTTCCG TCTTGAACAC CCTCCACAAA
GTCTTTGGTT TCAATGCCTT CCGCCCGAAT CAGGGGGAGG TTGTACAGGC CATACTTTCC
GGCAGGGATG CGTTTGCGGT GATGCCGACT GGCGGGGGAA AGTCGCTGTG TTATCAGCTG
CCCGCGGTGG TGATGGAGGG GACGTGCGTG GTGATCAGTC CGTTGATCGC GCTGATGAAG
GATCAGGTGG ACGGGGCGAG GGTAAACGGG ATCAGGGCTG CGTATCTGAA CAGTTCGCTC
TCTCCTGATG AGCAGTCGCT GGTGATGAGC GAACTGACGT CGAACAGGCT GGATCTGCTC
TATGTGGCGC CGGAGCGGTT TTCGCTGGAG CATTTCCAGA CAGTGCTGAA AGAGGTGAAG
ATCAGTATGG CGGTGATCGA CGAGGCGCAC TGCATTTCGG AATGGGGGCA TGATTTCCGG
CCGGACTATC TCTCCCTTTC TGCGCTCGTG GAGCTCTTTC CCGATGTTCC TGTTGCGGCC
TTCACGGCGA CGGCGACACA CAAGGTGCAG GCCGATATTC TCCGGAAGCT TGGTCTGCGC
GATCCGTTCG TCGTCCGGGC CTCGTTTGAC AGACCGAACC TGACCTACGA TGTCCGCTTC
AAGGACAATG TTTCAGAGCA GCTTGTCGGG CTCCTGAAGA GCAGCCCCGG CAAGGCGGGG
ATCATCTACC GGACCAGTCG CAAAAGCGTC AACGAGACGA CTGCCATGCT GCAGGCGAAG
GGATTCCGGG CGCTGCCGTA CCATGCGGGG CTCGGCGATG AGGAGCGAAA AAAGAACCAG
GAGACGTTTA TCCGCGACGA GGCGGATGTG ATCGTGGCAA CAGTGGCGTT CGGGATGGGA
ATCGACAAGT CCAACATCCG CTTCGTGATT CATGCCGACC TGCCGAAAAG CATCGAGAAC
TACTACCAGG AGACGGGACG TGCAGGACGC GACGGCGAAC CGGCACACTG CACGCTCCTC
TTTTCACAGG GCGATATTCC CAAGGTCCGC TTCTTCATCG ATACGATCAT TGACGAAACT
GAACGAAACA AAGCGCTCGA TGCCCTGCAG CGGGTTGTCT CTTTTGCATC AACGTCAGTC
TGCCGCCGCA TAACCCTGCT GGACTATTTC GGGGAGAGCT ATCCGAAGGA GAACTGCGGA
TCCTGCGACA TCTGCCTCGG CACACGCGAA GTGACTGACT GCACACGGGA GGCGCAGATG
CTGCTATCGG CAATTGCCCG AACGGAAGGG CGGTTCGGCG CAACCCATAT CATCGATATC
GTCATGGGAA GCAAGAACAA AAAGATTCTC GAACTCGGTC ACGACCGCCT GAAAACCTAC
GGGGTAGGCA AAGAGAAGAA CAAAAAATTC TGGCGCCATC TGATCGACGA ACTGCTGGCT
CAGAAGATGA TCGCAAAAGC AGAAGGGCTC TACCCGACGC TCTATCTTCT TGAACAGTCT
GTGCCGGTCC TGAAAGGCGA AGCGAGGCTG GAGATGGTGA GAGTGATTGA GAAGAAAACC
CCGAAACCCT CAAGAACCAT GGAGCATGGG GACTATGATC ACGAACTCTT TGAACAGCTG
AGAACGCTGC GTAAACAGCT GGCCGACGAA CAGGATATAC CGCCCTACAT CGTTTTTTCA
GACCGCTCGC TGCGCGACAT GGCAGCTCTG CTCCCGAAAG ACGACGAGAC AATGCTTGAG
GTCTCAGGGG TAGGGGAGGT CAAGCTCGAA CGCTATGGAC GGATCTTCCT CGACTGGATC
AGGAGGTATT GCCAACGCCA GCCTGAGCAA TCCGAAGCAA CCCAATCTTC ATAA
|
|---|
| Protein sequence | MTHDTLPASP SASVLNTLHK VFGFNAFRPN QGEVVQAILS GRDAFAVMPT GGGKSLCYQL
PAVVMEGTCV VISPLIALMK DQVDGARVNG IRAAYLNSSL SPDEQSLVMS ELTSNRLDLL
YVAPERFSLE HFQTVLKEVK ISMAVIDEAH CISEWGHDFR PDYLSLSALV ELFPDVPVAA
FTATATHKVQ ADILRKLGLR DPFVVRASFD RPNLTYDVRF KDNVSEQLVG LLKSSPGKAG
IIYRTSRKSV NETTAMLQAK GFRALPYHAG LGDEERKKNQ ETFIRDEADV IVATVAFGMG
IDKSNIRFVI HADLPKSIEN YYQETGRAGR DGEPAHCTLL FSQGDIPKVR FFIDTIIDET
ERNKALDALQ RVVSFASTSV CRRITLLDYF GESYPKENCG SCDICLGTRE VTDCTREAQM
LLSAIARTEG RFGATHIIDI VMGSKNKKIL ELGHDRLKTY GVGKEKNKKF WRHLIDELLA
QKMIAKAEGL YPTLYLLEQS VPVLKGEARL EMVRVIEKKT PKPSRTMEHG DYDHELFEQL
RTLRKQLADE QDIPPYIVFS DRSLRDMAAL LPKDDETMLE VSGVGEVKLE RYGRIFLDWI
RRYCQRQPEQ SEATQSS
|
|---|
| |