Gene Paes_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0040 
Symbol 
ID6458430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp41126 
End bp41902 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content55% 
IMG OID642724032 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002014753 
Protein GI194332893 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC AACGAAGAGA TTTTCTCAAA AAAGCCAGTC TCGGCGCACT TGCCGGGATC 
GGGGCGATGG CGGGGATCAT ACCGACCTTC GCCCTTGAAA AAACCGATAC GTCCGTCTTT
TCGGACCGAC CGCAGCCGGG AAAAACCAGA TGGGGAATGC TCATCGATAC CCGGAACTGC
AGGGAGGGGT GCAGCGAGTG CGTTGCCGCC TGTCATGCCA CCCATAACGT CCCTGATTTC
GGTGATTCGA AGAACGAGGT CAAATGGATA TGGAAAAGCC CTTATGAAAA AGCGTTTCCT
ACCTCGAGTC TGCAGCTGCC GAGCAGGCAG CTGCAGGAGC TTGACGTACT CACCCTTTGC
AATCATTGCG CCGAGCCGCC ATGTACGAAA GCCTGTCCGA CCGAGGCGAC CTTCAAACGA
TGGGATGGTA TCGTTGCGAT GGACTATCAT CGCTGCATAG GCTGCCGTTT CTGTATGGCT
GCCTGCCCAT ACGGTTCGCG CAGTTTCAAC TGGCAGGACC CGAGACCGGC AATCAGTGAG
TACAGCGACA CCTATCCGAC CAGAGAGCGG GGCGTTGTCG AAAAGTGCAA TTTCTGCTCC
GAGCGTCTTG TCAAGGGTCA GCAGCCAGCA TGTGTCGAGG CCTGCCCCGG CAAAGCTATT
ACCTTCGGAG ATCTCAACGA TCCGGCATCG GTCATCCGTA CGATGCTCGG AGATAATGAA
ACCGTGCAGC GTAAACCGGA GCTCGGTACG CTGCCCTCAG TATTCTACAT CATCTAA
 
Protein sequence
MNQQRRDFLK KASLGALAGI GAMAGIIPTF ALEKTDTSVF SDRPQPGKTR WGMLIDTRNC 
REGCSECVAA CHATHNVPDF GDSKNEVKWI WKSPYEKAFP TSSLQLPSRQ LQELDVLTLC
NHCAEPPCTK ACPTEATFKR WDGIVAMDYH RCIGCRFCMA ACPYGSRSFN WQDPRPAISE
YSDTYPTRER GVVEKCNFCS ERLVKGQQPA CVEACPGKAI TFGDLNDPAS VIRTMLGDNE
TVQRKPELGT LPSVFYII