Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0022 |
Symbol | |
ID | 6460239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 25177 |
End bp | 25851 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724014 |
Product | hypothetical protein |
Protein accession | YP_002014735 |
Protein GI | 194332875 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00321696 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00325564 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGTTAT CACTGCCGAA CTGGCTGATC CATATCTCAT CATCCGCAGA GTGGGGCATC GCCGCACTGC TGATGTATCG CTACGGAACC CTCATTGAAA GGAAGGATAT CCAGCGACTC GGGCTCTTCA TGATCCCTCA CTGGATAGGA AGCTGGTTTG TACTGGCTTA TCACATCAAG GGCGATAGCA TACCGCTCCT GCTCGATCTT TCCGAGACAG TCAACCTGTT CGGCAGCATC TCGCTGCTCT ATGCCTCGCT GGGCATTCTG AAAACCCTCA AAAGCACAAC AACGGTCAAC GTCATGGCTG TCGCGGGAAT TTTCCTGTTC AACGGCAGAC CGCAGTCCTA CATGGGAGAG GACATCTTCG ATGCGATTCT TCAGGTATCG AGCGTTGTCT ATATCAGCTT TCTCATCAGC CTGATCATGA TCCGCAAACG CGACCCCGCC CTTCTGTCGG GTCTCACCGT AGCCGGATTC TGGTTTGTGC TGGTGTTTAT CTCCGTCACG GTCTTTTTCA TCTACCTCTC CACGGATGTC AGAGGGTTTG CGACGCTATC GCACGACGAC CTTCTTCACG GATCGGCAGA AAGCCTTCTG ACCGTCAGCA ACCTTATGAT CGTACTCGGG ATCCACCGAC AGATCAAGGC GGCAAAACGT CGCCTGCAAC AGTGA
|
Protein sequence | MLLSLPNWLI HISSSAEWGI AALLMYRYGT LIERKDIQRL GLFMIPHWIG SWFVLAYHIK GDSIPLLLDL SETVNLFGSI SLLYASLGIL KTLKSTTTVN VMAVAGIFLF NGRPQSYMGE DIFDAILQVS SVVYISFLIS LIMIRKRDPA LLSGLTVAGF WFVLVFISVT VFFIYLSTDV RGFATLSHDD LLHGSAESLL TVSNLMIVLG IHRQIKAAKR RLQQ
|
| |