Gene Paes_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0020 
SymboldapD 
ID6458381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp22582 
End bp23445 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content53% 
IMG OID642724012 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_002014733 
Protein GI194332873 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.49214e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.15065e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAAG ATAAAAATGT GTTAGAAAAG AAGATTGAAG CGCTTTCGGC ACTCTCCGCT 
TCGGAACTCA AGGCAGAGAG CGGGGCACGC AACGTTTTTG CCGCATTCAA ACAGATGCTC
AACGAAGGCA CAATCCGCGC GGCTGAAAAG ATCGACGGTA CCTGGAGGGC CAATACCTGG
GTCAAGAAAG GCATTCTTCT CGGCATGAAG CTGGGCAGCA TGCAGGAAAA TACCATTCAG
TTCCGAGGAT ATTACGACTG GACCTTTATC GATAAGGATA CCTATCCTCT CAAGCGATTC
ACCAAGGATG ACGGAGTGCG TCTCGTTCCC GGAGGCTCCT CTGTCCGTGA CGGAGCCTGG
CTTGCGCCTT CCGTGGTCAT GATGCCTCCG GCATACGTTA ATGTCGGGGC ATATGTCGAT
GCCGGCACCA TGATCGACTC TCATGCGCTT GTAGGAAGCT GTGCGCAGAT AGGCCGTAAC
GTGCATCTTT CCGCAGCAGT CCAGATCGGA GGCGTCCTCG AGCCTATCGG CGCGGTTCCT
GTTGTCGTTG AAGATGATGT TATGATAGGC GGAAACTGCG GGATTTACGA GGGAACAATT
GTCTCGACCC GTGCTGTTAT CGGTACCGGT GTCATCCTGA ACGCTTCGAC GCCGGTCTAT
GATATTGTCA ACGAGTGCAT CATCCGCAAA ACGCCGGATT CTCCGCTCAT CATTCCGGAG
GGTGCGGTTG TTGTTGCCGG TTCGCGCAAG GTAAAGGGGG ATTTTGCCGC AGAAAACGGC
CTGTCCATCT ATACCCCTAT GATCATCAAA TACCGCGATG AGAAAACCGA CAGCGCGACA
GCCCTTGAAA GCGCTTTGCG CTGA
 
Protein sequence
MIEDKNVLEK KIEALSALSA SELKAESGAR NVFAAFKQML NEGTIRAAEK IDGTWRANTW 
VKKGILLGMK LGSMQENTIQ FRGYYDWTFI DKDTYPLKRF TKDDGVRLVP GGSSVRDGAW
LAPSVVMMPP AYVNVGAYVD AGTMIDSHAL VGSCAQIGRN VHLSAAVQIG GVLEPIGAVP
VVVEDDVMIG GNCGIYEGTI VSTRAVIGTG VILNASTPVY DIVNECIIRK TPDSPLIIPE
GAVVVAGSRK VKGDFAAENG LSIYTPMIIK YRDEKTDSAT ALESALR