Gene Paes_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0019 
Symbol 
ID6460807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp20912 
End bp22567 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content51% 
IMG OID642724011 
Productribonuclease, Rne/Rng family 
Protein accessionYP_002014732 
Protein GI194332872 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.01428e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.66802e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAGAAGA CGGTCAAGAA ACAGTTGTTG ATGAACAAGT CGGGTGATGA GATCCAGGTT 
GCTCTGGTCG AGGACGGTCG TCTTGCCGAA CTCGTGATAG AAAGGCCCGA CAGTCTGCGC
AGTATCGGTG ATATTTATCT TGGGCGTGTC CACAAGGTGG TCGAAGGCCT CAAAGCCGCT
TTTGTCGATA TCGGTCAGAA ATCAGACGGA TTTTTGCACT TTTCCGACGT CGGCACGACC
AACGAAGACT ACCGGGCTCT GATCGAGGAC GATGAAGACG ATGAGAACGG TGCCCTGGAA
GGCGAAGATG TTGAGAAAAA TGACGATGTC CAGGCTGAAT CAAAACCCCG GGCGTCTGAG
AAAGCTCCCC GTTCGGCAAC ACCGGAACGC AAACGGCAGT CGTATACGCA GATGATCGCC
GGTAAGCTCA AGGCCAATGA TTCCATTCTC GTTCAGGTCA TTAAAGAGCC CATAAGCAAT
AAAGGTTCGC GACTTACCTC GGATATTACC ATCGCGGGCC GGTTTATGGT GCTGCTGCCG
TTTGGCGGAG GACAGATAGC GGTTTCCCGC CGTGTGGTCT CCCGTAAGGA ACGCTCGCGC
CTGAAAAAAC TCGTCCGCTC GATTCTGCCC GAGGGTTTCG GGGCGATCAT CAGAACGGTC
GCAGAAAATC AGGAAGAGGA GCTCCTGAAA AAAGATCTGG AGAAGCTGCT CGTCAAATGG
CAGCAGATTG AGGAAAAGCT GCAGGATGCC AAGCCGCCTC AGCTGATCTT CAAAGAGGAT
ACCATTATTT CGAGCGTGCT TCGTGATTCG CTCAACAGTG ATGTGACTGA ACTGGTCGCA
AACTGTCCGT CGATCTACAA GGAGACGCTG AACTATATTC TCTGGGCAGC GCCTGAAATG
GAAAAGAACG TCACGCTCTA TCAGGGCAAA CTTCCTCTGT TTGAGGGCTA CGGTATTGCC
AAGGACGTCG AGTCGATATT CTCTCGAAAA GTGTGGCTGA AGTCCGGGGG CTATATTATT
ATCGAGCACA CCGAAGCGAT GGTGGTCGTC GACGTCAACA GCGGCCGCTA TGCAGCCAAG
AAAGAGCAGG AGGAGAACTC CCTGAAGACC AACCTCGAAG CTGCCCGTGA AGTTGTCCGC
CAGTTGCGGC TCCGTGATAT CGGCGGTATT ATCGTGGTTG ACTTTATTGA TATGCTCGAT
CAGAAAAACT CGAAGAAGGT GTTTGACTCC ATGAAGACCG AGCTTCGTCA TGATCGGGCG
AAGTCAAATA TCCTTCCCCT GTCGGATTTT GGTCTGATGC AGATCACTCG TGAAAGGATC
AGGCCCAGTC TGATGCAGCG TATGGGCGAT CAGTGTCCGG CCTGCGGCGG TTCAGGTGTC
GTGCAGGCAA GGTATACGAC CATCAACCAG ATCGAACGCT GGCTTCGCAA ATATGCTCTG
CAGCGCAAGG TGATGTTTCA GAAACTCGAT CTCTATGTCA GTCCAACCGT TGCCGAACCA
CTCTGCGATG AGGAGCGGAA AACAGAAATG AAATGGTTTC TGCAGCATAT GCTCTTTGTG
AAGATCAAAT CGGATGAAAG TCTGCGCAGT GACGATTTTC GGTTTTATCT CCAAAAGAAC
AACAAGGAAA TTACCTCAGA ATTCAGTGAT TTATAA
 
Protein sequence
MKKTVKKQLL MNKSGDEIQV ALVEDGRLAE LVIERPDSLR SIGDIYLGRV HKVVEGLKAA 
FVDIGQKSDG FLHFSDVGTT NEDYRALIED DEDDENGALE GEDVEKNDDV QAESKPRASE
KAPRSATPER KRQSYTQMIA GKLKANDSIL VQVIKEPISN KGSRLTSDIT IAGRFMVLLP
FGGGQIAVSR RVVSRKERSR LKKLVRSILP EGFGAIIRTV AENQEEELLK KDLEKLLVKW
QQIEEKLQDA KPPQLIFKED TIISSVLRDS LNSDVTELVA NCPSIYKETL NYILWAAPEM
EKNVTLYQGK LPLFEGYGIA KDVESIFSRK VWLKSGGYII IEHTEAMVVV DVNSGRYAAK
KEQEENSLKT NLEAAREVVR QLRLRDIGGI IVVDFIDMLD QKNSKKVFDS MKTELRHDRA
KSNILPLSDF GLMQITRERI RPSLMQRMGD QCPACGGSGV VQARYTTINQ IERWLRKYAL
QRKVMFQKLD LYVSPTVAEP LCDEERKTEM KWFLQHMLFV KIKSDESLRS DDFRFYLQKN
NKEITSEFSD L