| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0019 |
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| Symbol | |
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| ID | 6460807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 20912 |
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| End bp | 22567 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642724011 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002014732 |
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| Protein GI | 194332872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000201428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000166802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGAAGA CGGTCAAGAA ACAGTTGTTG ATGAACAAGT CGGGTGATGA GATCCAGGTT
GCTCTGGTCG AGGACGGTCG TCTTGCCGAA CTCGTGATAG AAAGGCCCGA CAGTCTGCGC
AGTATCGGTG ATATTTATCT TGGGCGTGTC CACAAGGTGG TCGAAGGCCT CAAAGCCGCT
TTTGTCGATA TCGGTCAGAA ATCAGACGGA TTTTTGCACT TTTCCGACGT CGGCACGACC
AACGAAGACT ACCGGGCTCT GATCGAGGAC GATGAAGACG ATGAGAACGG TGCCCTGGAA
GGCGAAGATG TTGAGAAAAA TGACGATGTC CAGGCTGAAT CAAAACCCCG GGCGTCTGAG
AAAGCTCCCC GTTCGGCAAC ACCGGAACGC AAACGGCAGT CGTATACGCA GATGATCGCC
GGTAAGCTCA AGGCCAATGA TTCCATTCTC GTTCAGGTCA TTAAAGAGCC CATAAGCAAT
AAAGGTTCGC GACTTACCTC GGATATTACC ATCGCGGGCC GGTTTATGGT GCTGCTGCCG
TTTGGCGGAG GACAGATAGC GGTTTCCCGC CGTGTGGTCT CCCGTAAGGA ACGCTCGCGC
CTGAAAAAAC TCGTCCGCTC GATTCTGCCC GAGGGTTTCG GGGCGATCAT CAGAACGGTC
GCAGAAAATC AGGAAGAGGA GCTCCTGAAA AAAGATCTGG AGAAGCTGCT CGTCAAATGG
CAGCAGATTG AGGAAAAGCT GCAGGATGCC AAGCCGCCTC AGCTGATCTT CAAAGAGGAT
ACCATTATTT CGAGCGTGCT TCGTGATTCG CTCAACAGTG ATGTGACTGA ACTGGTCGCA
AACTGTCCGT CGATCTACAA GGAGACGCTG AACTATATTC TCTGGGCAGC GCCTGAAATG
GAAAAGAACG TCACGCTCTA TCAGGGCAAA CTTCCTCTGT TTGAGGGCTA CGGTATTGCC
AAGGACGTCG AGTCGATATT CTCTCGAAAA GTGTGGCTGA AGTCCGGGGG CTATATTATT
ATCGAGCACA CCGAAGCGAT GGTGGTCGTC GACGTCAACA GCGGCCGCTA TGCAGCCAAG
AAAGAGCAGG AGGAGAACTC CCTGAAGACC AACCTCGAAG CTGCCCGTGA AGTTGTCCGC
CAGTTGCGGC TCCGTGATAT CGGCGGTATT ATCGTGGTTG ACTTTATTGA TATGCTCGAT
CAGAAAAACT CGAAGAAGGT GTTTGACTCC ATGAAGACCG AGCTTCGTCA TGATCGGGCG
AAGTCAAATA TCCTTCCCCT GTCGGATTTT GGTCTGATGC AGATCACTCG TGAAAGGATC
AGGCCCAGTC TGATGCAGCG TATGGGCGAT CAGTGTCCGG CCTGCGGCGG TTCAGGTGTC
GTGCAGGCAA GGTATACGAC CATCAACCAG ATCGAACGCT GGCTTCGCAA ATATGCTCTG
CAGCGCAAGG TGATGTTTCA GAAACTCGAT CTCTATGTCA GTCCAACCGT TGCCGAACCA
CTCTGCGATG AGGAGCGGAA AACAGAAATG AAATGGTTTC TGCAGCATAT GCTCTTTGTG
AAGATCAAAT CGGATGAAAG TCTGCGCAGT GACGATTTTC GGTTTTATCT CCAAAAGAAC
AACAAGGAAA TTACCTCAGA ATTCAGTGAT TTATAA
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| Protein sequence | MKKTVKKQLL MNKSGDEIQV ALVEDGRLAE LVIERPDSLR SIGDIYLGRV HKVVEGLKAA
FVDIGQKSDG FLHFSDVGTT NEDYRALIED DEDDENGALE GEDVEKNDDV QAESKPRASE
KAPRSATPER KRQSYTQMIA GKLKANDSIL VQVIKEPISN KGSRLTSDIT IAGRFMVLLP
FGGGQIAVSR RVVSRKERSR LKKLVRSILP EGFGAIIRTV AENQEEELLK KDLEKLLVKW
QQIEEKLQDA KPPQLIFKED TIISSVLRDS LNSDVTELVA NCPSIYKETL NYILWAAPEM
EKNVTLYQGK LPLFEGYGIA KDVESIFSRK VWLKSGGYII IEHTEAMVVV DVNSGRYAAK
KEQEENSLKT NLEAAREVVR QLRLRDIGGI IVVDFIDMLD QKNSKKVFDS MKTELRHDRA
KSNILPLSDF GLMQITRERI RPSLMQRMGD QCPACGGSGV VQARYTTINQ IERWLRKYAL
QRKVMFQKLD LYVSPTVAEP LCDEERKTEM KWFLQHMLFV KIKSDESLRS DDFRFYLQKN
NKEITSEFSD L
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