| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0017 |
|---|
| Symbol | rnhB |
|---|
| ID | 6458392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 19959 |
|---|
| End bp | 20579 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642724009 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_002014730 |
|---|
| Protein GI | 194332870 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00136282 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000928974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | TTGACTTTAA CAACCCTGTA CGAACAACAA TTCTGGCCTG ATCTGCAAAG AGTTTGCGGC
ATCGACGAAG CTGGCAGAGG ACCGCTCGCA GGACCTGTCG TCGCTGCGGC GGTGGTCTTT
CCGCGCCATT TTCGACCTCA TGGCTTTATC TCGACGCTGA ACGACTCCAA AACAATCCCG
CCACGAAGAC GCAAAGAGCT TGCTCAGGCA ATTATTCAGG AAGCAGAAGA CTACGCCATA
GCGGAAGTTG ACCATATCGA GATAGACCGG ATCAATATTC TGCAGGCAAC CATGCTTGCC
ATGAACAATG CCGCCGGCTC ACTCGAACAC AGCCCGTCAC TGCTGCTGAT CGACGGAAAC
CGCTTTCATC CGGCAAGGCC TGTTGCATTC AGAACGATAG TGAAAGGAGA TGCTTCGGTC
TTTTCTATCG CGGCAGCATC GATCCTGGCA AAGACACACC GAGACGCCAT CATGACAGAA
GCCGCACTGC TCTACCCGGA GTACGGTTTC GAAAAACATT TCGGCTACCC GACCAGAGAA
CATATCGAAG CCATAAGAAA CCATGGACGC TCTCCGATCC ACAGGATGAG CTTCCGGCTC
CGCCAGCTCG GAGAAAAATA A
|
|---|
| Protein sequence | MTLTTLYEQQ FWPDLQRVCG IDEAGRGPLA GPVVAAAVVF PRHFRPHGFI STLNDSKTIP
PRRRKELAQA IIQEAEDYAI AEVDHIEIDR INILQATMLA MNNAAGSLEH SPSLLLIDGN
RFHPARPVAF RTIVKGDASV FSIAAASILA KTHRDAIMTE AALLYPEYGF EKHFGYPTRE
HIEAIRNHGR SPIHRMSFRL RQLGEK
|
|---|
| |