Gene Paes_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0017 
SymbolrnhB 
ID6458392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp19959 
End bp20579 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content53% 
IMG OID642724009 
Productribonuclease HII 
Protein accessionYP_002014730 
Protein GI194332870 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00136282 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.28974e-07 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGACTTTAA CAACCCTGTA CGAACAACAA TTCTGGCCTG ATCTGCAAAG AGTTTGCGGC 
ATCGACGAAG CTGGCAGAGG ACCGCTCGCA GGACCTGTCG TCGCTGCGGC GGTGGTCTTT
CCGCGCCATT TTCGACCTCA TGGCTTTATC TCGACGCTGA ACGACTCCAA AACAATCCCG
CCACGAAGAC GCAAAGAGCT TGCTCAGGCA ATTATTCAGG AAGCAGAAGA CTACGCCATA
GCGGAAGTTG ACCATATCGA GATAGACCGG ATCAATATTC TGCAGGCAAC CATGCTTGCC
ATGAACAATG CCGCCGGCTC ACTCGAACAC AGCCCGTCAC TGCTGCTGAT CGACGGAAAC
CGCTTTCATC CGGCAAGGCC TGTTGCATTC AGAACGATAG TGAAAGGAGA TGCTTCGGTC
TTTTCTATCG CGGCAGCATC GATCCTGGCA AAGACACACC GAGACGCCAT CATGACAGAA
GCCGCACTGC TCTACCCGGA GTACGGTTTC GAAAAACATT TCGGCTACCC GACCAGAGAA
CATATCGAAG CCATAAGAAA CCATGGACGC TCTCCGATCC ACAGGATGAG CTTCCGGCTC
CGCCAGCTCG GAGAAAAATA A
 
Protein sequence
MTLTTLYEQQ FWPDLQRVCG IDEAGRGPLA GPVVAAAVVF PRHFRPHGFI STLNDSKTIP 
PRRRKELAQA IIQEAEDYAI AEVDHIEIDR INILQATMLA MNNAAGSLEH SPSLLLIDGN
RFHPARPVAF RTIVKGDASV FSIAAASILA KTHRDAIMTE AALLYPEYGF EKHFGYPTRE
HIEAIRNHGR SPIHRMSFRL RQLGEK