Gene Paes_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0015 
Symbol 
ID6458832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp17535 
End bp19469 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content50% 
IMG OID642724007 
ProductDNA gyrase, B subunit 
Protein accessionYP_002014728 
Protein GI194332868 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.55334e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCAGAAA CCCAGACTCC GTCCGCTTCG TCATCATATC TGGCGACCAA TATTCAGATT 
CTCGACGGTA TAGAGCATGT CCGTAAACGC CCGGCGATGT ACATCGGCGA CATCAACGTC
CGTGGATTGC ATCACCTCAT CTATGAGATC GTTGACAACT CGATCGATGA AACGCTTGCA
GGATATAATG ATACGATTGA AATGTCACTC AATGACGACG GCTCTGTCAC GGTCTCGGAC
AACGGCCGCG GCATTCCGGT AGACATGCAT CCCCAGAAAA AGAAGTCTGC GCTTGAACTG
GTCATGACAG TTATCGGTGC GGGCGGAAAG TTCGACAAGG GCGCTTATAA AGTGTCCGGC
GGTCTGCACG GCGTCGGCGC CTCGGTGGTC AACGCGCTGT CGGAGTGGTG CGAGGTCGAG
GTGAGCAGGG ACGGCAAAGT CTGGTATCAG CGATACCACA GAGGTGTCCC CCAGTGCGAA
GTCAAAATTA TCGGTGAAAC CGATAAAACC GGCACAAAAA CCACATTCAT GCCTGATGCT
TCGATTTTCA AGACCACTGA ATTCCGAAAA GACGTCATTA TCGACCGCAT GAGAGAACTG
GCGTTTCTCA ACAGTGTACT CAAGATTGTC GTCAAAGACA CCGACGATTC GGAAGAAACC
TTTCATTATG AAGGCGGCAT CAAAGAGTTT GTCACCTATA CCGATCATAA CAGGATTGCG
CTTGTCAAGG AACCAGTTTA CCTCTACGGA GAGCGTGACA CGACAGTGGT CGAAATAGCA
CTGCAGTACA ACGACTCCTA TCAGGAAAAC GTCTTCAGCT ACGTCAATAA CATCAATACC
CACGAAGGGG GTACGCATAT GACTGGTTTC CGCAAGGCGC TGACCAGAAC ACTGAATGCA
TACGCCCAGA AAAACGACCT GCTTAAAAAT CTCAAGCTCT CATTGACAGG TGATGATTTC
AAGGAAGGAC TGACCGCTAT CATCTCCGTG AAAGTTGCCG AACCTCAATT CGAAGGCCAG
ACAAAAACAA AACTCGGCAA CTCTGAAACA CAGAGTATTG TCGAAAGCAT CGTCAATGAA
CAGCTTGCCG AGTTTCTCGA AAGCAATCCC AATGTGCTCA AGACCATCAT CGAGAAAGTC
AAAAGCGCAG CGCTTTCAAG AGATGCTGCA AGAAAAGCAA AGGAGCTGAC CCGACGCAAG
TCCGTGCTGG AAAGCACCGG CCTGCCGGGC AAACTTGCTG ACTGCTCAAT CAACGATCCG
GAACACTGCG AACTTTACAT CGTCGAGGGT GACTCGGCAG GCGGCAGTGC CAAGCAGGGA
CGGGACCGGA GTTTTCAGGC GATCCTTCCG CTGAAGGGCA AAATTCTCAA TGTGGAAAAG
GCCCGGCTGC ACAAGATGCT TGAAAACGAA GAAATCAAGA CCATTATCCT GGCACTCGGC
ACAAACTTCG GAGAAGATGA GTTTATGGCC GACAAACTTC GCTACGGCAA GATCATCATT
ATGACTGATG CCGATGTGGA TGGCGCCCAT ATCAGAACGC TCCTGCTGAC CTTTTTCTTC
CGCCATATGC GCCCCCTCAT TGAAGCAGGC AAAGTCTTTA TCGCACAGCC GCCTCTCTAC
CTTATCAAAG CAGGCAAGGA GCAGAAATAC GCCTGGGACG AAGATGAGCG AACAACCATC
ATGGAGATGA TGAAAAAATC ACAGAAAGGC AAAACCAATA TCAATATTCA GCGATATAAA
GGTCTTGGTG AAATGAACCC TGAACAGCTC TGGAGCACGA CGATGGATCC TGAGCACCGC
TCGCTGCTTC AGGTAACGGT GGAAAACGCA ATGGAAGCGG ACCAGGTCTT CTCGACCCTG
ATGGGCGACA AAGTTGATCC GCGCCGTGAA TTCATTGAAA AGAACGCCCG GTATGTCCGG
CGATTAGATG TCTGA
 
Protein sequence
MSETQTPSAS SSYLATNIQI LDGIEHVRKR PAMYIGDINV RGLHHLIYEI VDNSIDETLA 
GYNDTIEMSL NDDGSVTVSD NGRGIPVDMH PQKKKSALEL VMTVIGAGGK FDKGAYKVSG
GLHGVGASVV NALSEWCEVE VSRDGKVWYQ RYHRGVPQCE VKIIGETDKT GTKTTFMPDA
SIFKTTEFRK DVIIDRMREL AFLNSVLKIV VKDTDDSEET FHYEGGIKEF VTYTDHNRIA
LVKEPVYLYG ERDTTVVEIA LQYNDSYQEN VFSYVNNINT HEGGTHMTGF RKALTRTLNA
YAQKNDLLKN LKLSLTGDDF KEGLTAIISV KVAEPQFEGQ TKTKLGNSET QSIVESIVNE
QLAEFLESNP NVLKTIIEKV KSAALSRDAA RKAKELTRRK SVLESTGLPG KLADCSINDP
EHCELYIVEG DSAGGSAKQG RDRSFQAILP LKGKILNVEK ARLHKMLENE EIKTIILALG
TNFGEDEFMA DKLRYGKIII MTDADVDGAH IRTLLLTFFF RHMRPLIEAG KVFIAQPPLY
LIKAGKEQKY AWDEDERTTI MEMMKKSQKG KTNINIQRYK GLGEMNPEQL WSTTMDPEHR
SLLQVTVENA MEADQVFSTL MGDKVDPRRE FIEKNARYVR RLDV