Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0003 |
Symbol | |
ID | 6459271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 2893 |
End bp | 4005 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642723995 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_002014716 |
Protein GI | 194332856 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.152297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGACTTG ATGAGATAAA GATTCAGAAC TTCAGAAAGC ATAGTGAGCT TATCTTTTCC CCTTCAGAGG GGATTAATCT GATTTTTGGA CCAAATGGTT CGGGTAAAAC CAATATTTTG GAGGCTATCC ATTATTGTGC TCTGACTAAA GGGTTCAATC GAACGACTGA TCGACAATGC ATGAACTTTT CAGCAGAGTC TTTTCTGCTG AAAAGTTTGT TTACCAGTGA TACTGGCTGT CAATACAGGG TTCACGTTGA TTTTTCTACC AATGGAGGAA AAAGTATTTC CCTTAATAAC AGCCAATTAG AAAAATTTTC AGCCCTGATA GGCCTCATTC CCTGTATACT TTTTTCGCCT GCCGAGATCA CGATCGTTCA TGGTTCACCA CAGGAACGAA GACGATTTCT TGACAATGCT CTTTGTCAGA TCAGTAAAAG TTATCTGGAA CAACTGCTGC AATACAGGAG AATTCTTCAG CAGAGAAATG CACTGCTTCA TTCCTCTTGG GATCGTTCTT CTCCGGCTCC GGATATGAAT ATCTGGACTG AGCTTCTTGC TGAATCGGGA GCTTTCATCA TCAAGGAGAG GATGGATTTT CTCGATGAGT TTCAACCCTA TTTCAGCAAT GCCTATGCCA TTCTCGATAC GGGAGAGATC CCCAGGTTAA CGTATCGTTC TTCTCTTGGT AAAGCACTTG TATCATCTGA TCGAGCAGGT ATTGCCGATA GTCTTATGCA TCGATTCGGA GAAATTCAGC ATCAGGAGCA AGTAAGAAAA CAAACTTTAC TTGGTCCTCA CCGTGATGAG ATTTTGTTTT ATCTGGATGG TTCAGATGTT AAAAAATATG CATCACAAGG ACAGACGAGG ACGTTTTTGA TTGCTTTAAA GGTTGCTCTG CAGCGGTTTC TTTTCGATAA AAAGGGGGAG CAGTCGATTT TTCTTCTCGA TGATATTTTT AGTGAGCTTG ATCAAAGACG CGTAGAGCGA GTCCTTGAGA TGATTGCCGG ATTTGGTCAG TCTCTTATTA CGTCCACTGA AAAAACCGGG TTGTCTTTTC TTCATGAGAT TTCAATTCAC GATATGCTGT ACAAGCATGG AGATCCTTTG TGA
|
Protein sequence | MRLDEIKIQN FRKHSELIFS PSEGINLIFG PNGSGKTNIL EAIHYCALTK GFNRTTDRQC MNFSAESFLL KSLFTSDTGC QYRVHVDFST NGGKSISLNN SQLEKFSALI GLIPCILFSP AEITIVHGSP QERRRFLDNA LCQISKSYLE QLLQYRRILQ QRNALLHSSW DRSSPAPDMN IWTELLAESG AFIIKERMDF LDEFQPYFSN AYAILDTGEI PRLTYRSSLG KALVSSDRAG IADSLMHRFG EIQHQEQVRK QTLLGPHRDE ILFYLDGSDV KKYASQGQTR TFLIALKVAL QRFLFDKKGE QSIFLLDDIF SELDQRRVER VLEMIAGFGQ SLITSTEKTG LSFLHEISIH DMLYKHGDPL
|
| |