| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0002 |
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| Symbol | |
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| ID | 6459280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1749 |
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| End bp | 2876 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642723994 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_002014715 |
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| Protein GI | 194332855 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.145618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAAT TCTCAACCTC GATAAAGCAT TTTCAGGATG CAGTCAATAA AGTTACTCAG
GCTATTCCGG CTAAAGCACT TGATCCCCGG TACGAAAATC TGCACCTCTT TCTGGACAAC
GGATCTTTGA CACTGTATGC TACAGATGGT GAACTTTCAA TTACAGCAAC AACCGAGGTT
GAATCGACAG ACCAGGGAAG TTTTGGAATG AAGGCAAGAA CTATTCTTGA ATTTCTCCGT
AGCATGTACG ATACCTCTGT TACATTCAAC ATCGAAAGAC AGCAATTAAG TGATCAGGGT
CTAATCGATA TTTCGACTGA TAAAGGTCGT TACAGGATTC CTTGTTCATT TGAAAGCAAA
CAGGAAAAAA AGGATAAGGA CTTCGATCTT GAACTGACCC TTACCTCTGC AGATCTGCTC
GACATTATTC AGAAAACCAT CTTTGCCTGT AGCGTTGATG GAATGAGACC GGCAATGATG
GGTGTTCTGC TTGAATTGGA AAACAACAAG ATAACAGCAG TTTCAACCGA TGGACACAGA
CTTGTTCGTT GTATTAAAAC CTGTGAATCA GGAGTTGAAA CCAAAAAAAG GATCGTTATT
CCAGCAAGGG TACTCTCTAT TCTGCAAAAA CTGACTCAGG ACGACACGGT TACGCTGTCA
ATTGATACCA CGAATAATTC TGTACGTTTT GTTTTTCCAA ACCTGATCCT TGATGCAGCT
CTCATTGTCG AACAGTATCC CAACTACGAA GCAGTCATTC CGCTTGACAA TGAAAAAATT
GTTTCAATCA ATCGTTCAAC ACTCTATGAT TCAGTCAGAA GAGTAGGAAA GTTTTCCAGC
ATTGGAGATA TCAGAATTTC TGTAGCTGAA TCGGTCATGA CGTTAATGGC AGAGAATACA
AACGAGGGTG AATCAGCTCA GGAAGAAATT GCCTGCGTCT ATAGCGGTGA AGATCTTGTT
ATCGGTTTCA ATTCAAAATT TATCGAAGCA GCTCTTGGCC ATATCGAAAC AGAAACTATT
ACGATGGAAC TGAGTAGTCC GACAACGGCG GTTATTCTTA AACCTGAGAA GGAAGAAGAG
CAACAGAATC TGATTATTCT CGTGATGCCG GTACGCATCA ATAACTGA
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| Protein sequence | MMKFSTSIKH FQDAVNKVTQ AIPAKALDPR YENLHLFLDN GSLTLYATDG ELSITATTEV
ESTDQGSFGM KARTILEFLR SMYDTSVTFN IERQQLSDQG LIDISTDKGR YRIPCSFESK
QEKKDKDFDL ELTLTSADLL DIIQKTIFAC SVDGMRPAMM GVLLELENNK ITAVSTDGHR
LVRCIKTCES GVETKKRIVI PARVLSILQK LTQDDTVTLS IDTTNNSVRF VFPNLILDAA
LIVEQYPNYE AVIPLDNEKI VSINRSTLYD SVRRVGKFSS IGDIRISVAE SVMTLMAENT
NEGESAQEEI ACVYSGEDLV IGFNSKFIEA ALGHIETETI TMELSSPTTA VILKPEKEEE
QQNLIILVMP VRINN
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