| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MARTH_orf373 |
|---|
| Symbol | lig |
|---|
| ID | 6417794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycoplasma arthritidis 158L3-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011025 |
|---|
| Strand | - |
|---|
| Start bp | 335106 |
|---|
| End bp | 337103 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 4 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642715507 |
|---|
| Product | DNA ligase |
|---|
| Protein accession | YP_001999946 |
|---|
| Protein GI | 193216704 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
|---|
| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000122507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA AAGAGAAAAT TAGAAATGAA GTCTTTGAAC TCCAAGCTAA AATAAACGAA
TGAGATAATG CTTATTATAA TCTTGATGCT CCGTTGGTCG AAGATGCTAT CTATGATCGT
GAAATTTTAA AGCTAAAAAA ATTAGAAGAA CAATATAGTT CATATTTTAG TTTTGAAGAA
CTAGCCAATT CACCGACACA GAAAATCAAT GCTAAGAGTT CTGACTTATT TAAAAAAGTT
ACCCATGATA GTCCAATGCT TTCACTAAAT AAAGCTTATA CAGAAGAAGA AATTCAAAAG
TTTATTGATA ATATTAAAAA AGTTACACCC ACTTTTAGTT TTTTTCTAGA ACCTAAAATT
GATGGTTTGT CAATTTCAAT TAAATACCGG AATGGACAAC TATTCCAAGC AGTCACTAGG
GGAGATGGTT TAGTCGGCGA AGATGTTACT GAGAATATTA AGCAAATTAA AAATATTCCC
AAGGAAATAG CTTATCAAAA GCCACTTGAA GTTCGAGGCG AAGTTTATTT AGCATTGAGT
GAATTTGAAA AAATTAATTT AAATTTTCAA AAAGAAAATA AACCTTTGAT GGCCAATCCT
CGTAATGCTG CTGCTGGGAC TTTAAGACAA CTTGATAAAG AAATTGTAGC AAATCGTAAT
CTTTCTGCTT TTTTATACAA TATTGTTGCA CCAGAAGATC ACAACATTTT TACTATTTTA
GAAGCTAGAG ATTTTTTAAA AAACTTAGGC TTTTCGGTAA CTAAAGAAGC AACTTATGCT
AAAGATTTAT CCGAAATTAA TAGCTATATT GAAAACTTTA AGCACCTTAA AAAGACTCTT
GATTATGAAA CTGATGGTGT AGTTATCAAA TTAAACGAAC TGCAACATTA CGACGCGCTT
GGTGCTACTA ATAAATTTCC CCACTCCGCT ATTGCTTTTA AGTATGAACC TAACACGACA
ACAACAGTTT TAAAAAATAT TTTTATTACT GTAGGTAGAA CGGGGCTTGT TACATATAAT
GCTGAACTTG AACCGGTGAT TCTTTCGGGT AGTTGTATTA CCTTTGCCAC TTTAAATAAT
TACCAATATA TAAAAGATCT AAAGCTCAAC AAAGGGGATT TAGTATATAT AAAAAAAGCT
GGTGAAATTA TTCCATGTGT AATTGGTTTA GTTAATAAAA AACATGAAGA AACTGAGTTT
AATAAATTTT TAAAATGCCC ATATTGTAAT AGCGATCTAA TTGAAACTGA CACTTTGTTA
GAACAGTATT GTAGTAACGA AAATTGTCCG GAAATTAGAA GAAAAAAAAT CATTCATTTT
GCTTCAAAAA AGGCAATGGA ACTAAACTCA TTAGGTGAAA AAAACATTGA TGTTTTTATT
AACGAAGGGT TACTTGAAAA TGTGATTGAT TTTTATAAGT TAAAAGAAAA AAAAGACAAG
ATTATGTCCT TAGAACGATT TGGCACAAAA TCGGTTATGA ACATTTTAAA ATCAATTGAA
GAATCAAAGA AAAACTCATT GGATCGTGTA ATTTTTGGCC TATCCATTAA ACATATCGGT
TCAAAAGTAG CCTATTTTCT AGCATCAAAA ATTCTTAAAT TAAGTAATTT TCTTGATTTT
GATTTTGACT CGTTAATCTC TTATAATGAA ATTGGCGAAA AAATCATTTC GTCTCTTAAA
AACTGAGTAG CCAAAGAAGA AAATAAAAAT CTTGTCAAGG ACTTGCTTGA TAATGATGTG
GACCTAGAAT TTATTGCCAC TAAAAAAACT GAACGTTTTG CTCAACTTAG TTTTGTAATC
ACAGGTACAC TTTCGCAGCC AAGATCGCAT TTTGAAAAAC TAATTAAAGA AAATGGGGGT
TCGATTTCTT CGGCCGTTTC AGCTAAAACC TCTTATTTAT TAGTTGGCGA AGACGCTGGT
TCAAAATTGG CTAAAGCTCG AGCTTTAAAT GTAAAGATTC TTGACGAAGA AGCTTTTAAC
GAACTTTTAG TTTCTTAA
|
|---|
| Protein sequence | MTEKEKIRNE VFELQAKINE WDNAYYNLDA PLVEDAIYDR EILKLKKLEE QYSSYFSFEE
LANSPTQKIN AKSSDLFKKV THDSPMLSLN KAYTEEEIQK FIDNIKKVTP TFSFFLEPKI
DGLSISIKYR NGQLFQAVTR GDGLVGEDVT ENIKQIKNIP KEIAYQKPLE VRGEVYLALS
EFEKINLNFQ KENKPLMANP RNAAAGTLRQ LDKEIVANRN LSAFLYNIVA PEDHNIFTIL
EARDFLKNLG FSVTKEATYA KDLSEINSYI ENFKHLKKTL DYETDGVVIK LNELQHYDAL
GATNKFPHSA IAFKYEPNTT TTVLKNIFIT VGRTGLVTYN AELEPVILSG SCITFATLNN
YQYIKDLKLN KGDLVYIKKA GEIIPCVIGL VNKKHEETEF NKFLKCPYCN SDLIETDTLL
EQYCSNENCP EIRRKKIIHF ASKKAMELNS LGEKNIDVFI NEGLLENVID FYKLKEKKDK
IMSLERFGTK SVMNILKSIE ESKKNSLDRV IFGLSIKHIG SKVAYFLASK ILKLSNFLDF
DFDSLISYNE IGEKIISSLK NWVAKEENKN LVKDLLDNDV DLEFIATKKT ERFAQLSFVI
TGTLSQPRSH FEKLIKENGG SISSAVSAKT SYLLVGEDAG SKLAKARALN VKILDEEAFN
ELLVS
|
|---|
| |