| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MARTH_orf131 |
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| Symbol | spoU |
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| ID | 6418047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycoplasma arthritidis 158L3-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011025 |
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| Strand | - |
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| Start bp | 122719 |
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| End bp | 123408 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 4 |
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| GC content | 32% |
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| IMG OID | 642715313 |
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| Product | SpoU class tRNA/rRNA methyltransferase |
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| Protein accession | YP_001999772 |
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| Protein GI | 193216530 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACT TAATTTATGG TAAAAACTCC GTTCTAGATG CTCTAAAAGC AAATTTCCCT
ATTGCTAAAA TCTACTTGCA AAAAGGATTA GTAAATAAAG CAATAACTTT CAAAAATATT
GAATACTTAT CAATCCAAGA AATGAATCAA TTAGTTAAAA ATGGTAATCA CCAAGGTTAT
ATTGCAGAAA TTTATAACTA TCAATATTAT GATTTGGGCA CTATTTTTAA AGATAAGCCT
AATCTTGTAT TAATGCTAGA TCACATTCAA GATCCACACA ATTTTGGGGC TATTATTAGA
AATGCTAATG GTTTTGGAAT TAAACATATT ATCATTCCCA AAAATCGAGC ATGTGAAGTT
ACACCTACTG TACTAAAAAT TTCTTCAGGC GCTTTCACTG AAATTAAAAT TATTAGAGTA
GGCAGCCTTT TTGATACATT AAAAGAATTG CAAAAAAATG GATTTTGAAT CTATAGCTCT
ACGCTTGATG ACAAAGCAAC GAAACTTCAT AAGACTAAAT TTGCTACACC AACTTGTCTG
ATTGTTGGTA ATGAAGAAAG CGGCGTTTCT CATACCCTTA TTAAACACTC CGATGCTCTT
GTTTATATAG AACAAAAAGG CACTGTACAA TCGCTTAATG TGGCAAGCGC CACGGCGGTG
TTGTTATATG AAGCAACCAA GGAAAATTAA
|
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| Protein sequence | MKNLIYGKNS VLDALKANFP IAKIYLQKGL VNKAITFKNI EYLSIQEMNQ LVKNGNHQGY
IAEIYNYQYY DLGTIFKDKP NLVLMLDHIQ DPHNFGAIIR NANGFGIKHI IIPKNRACEV
TPTVLKISSG AFTEIKIIRV GSLFDTLKEL QKNGFWIYSS TLDDKATKLH KTKFATPTCL
IVGNEESGVS HTLIKHSDAL VYIEQKGTVQ SLNVASATAV LLYEATKEN
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