Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5312 |
Symbol | |
ID | 6413013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5733186 |
End bp | 5733539 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642715201 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_001994273 |
Protein GI | 192293668 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAATCG GGGAATTGGC GCGCCGCTGC GGCGTCAGCG CGCGGATGCT GCGCTATTAC GAGACAGAGG GGTTGTTGCG GCCCGGCCGC TCGCCAGCGG GGTACCGGCT GTACCGTCCG GCCGACATCA CGACCGTGCA GCGAATCACC ACGCTGCAAG CCGCCGGGCT GACGCTGGCG AAGATCCGGC TGCTGCTGCC CTGCGCCGAG ACGGATTCGG GCGGATTCCG GCCCTGCCCG GCATTCCGCG ACGGTATTCG CCGGCGGCTG GCCGAAATCG ACGGCCAGAT CGCCGCGCTG GCGGCCAGTC GCCGCCTGCT GCGCGCCTAT CTGGAGCAGA CTCCGCTGCG GTGA
|
Protein sequence | MQIGELARRC GVSARMLRYY ETEGLLRPGR SPAGYRLYRP ADITTVQRIT TLQAAGLTLA KIRLLLPCAE TDSGGFRPCP AFRDGIRRRL AEIDGQIAAL AASRRLLRAY LEQTPLR
|
| |