Gene Rpal_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5312 
Symbol 
ID6413013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5733186 
End bp5733539 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content70% 
IMG OID642715201 
Producttranscriptional regulator, MerR family 
Protein accessionYP_001994273 
Protein GI192293668 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCG GGGAATTGGC GCGCCGCTGC GGCGTCAGCG CGCGGATGCT GCGCTATTAC 
GAGACAGAGG GGTTGTTGCG GCCCGGCCGC TCGCCAGCGG GGTACCGGCT GTACCGTCCG
GCCGACATCA CGACCGTGCA GCGAATCACC ACGCTGCAAG CCGCCGGGCT GACGCTGGCG
AAGATCCGGC TGCTGCTGCC CTGCGCCGAG ACGGATTCGG GCGGATTCCG GCCCTGCCCG
GCATTCCGCG ACGGTATTCG CCGGCGGCTG GCCGAAATCG ACGGCCAGAT CGCCGCGCTG
GCGGCCAGTC GCCGCCTGCT GCGCGCCTAT CTGGAGCAGA CTCCGCTGCG GTGA
 
Protein sequence
MQIGELARRC GVSARMLRYY ETEGLLRPGR SPAGYRLYRP ADITTVQRIT TLQAAGLTLA 
KIRLLLPCAE TDSGGFRPCP AFRDGIRRRL AEIDGQIAAL AASRRLLRAY LEQTPLR