| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5304 |
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| Symbol | |
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| ID | 6413005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5725790 |
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| End bp | 5726455 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715193 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001994265 |
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| Protein GI | 192293660 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGGTGC TGGTGGTCGA GGACGACAGC CGAATCGCGT CGGAGCTGGC GCGCGGCCTC
GGCGAAGCCG GTTACCTCGC CGAGATCGTC GGTGACGGCG AAGAGGCGTG GTTTCGCGGT
GATACCGAAG ATTACGCCGC CATCATCCTC GACCTCGGTC TGCCCGGGCT CGACGGCCTC
ACCATCCTGA AGCGCTGGCG CGACAACGGC CGCCTCACCC CGGTGCTGAT ACTCACCGCA
CGCGGAAGCT GGGCCGAACG GGTCGACGGC ATCGATGCCG GCGCCGACGA CTACCTGCCG
AAGCCGTTCC AGATGGAGGA GCTGCTGGCG CGGCTGCGCT CGATCGTGCG GCGCTCGGCC
GGCCATGCCT CGTCGGTGGT CACCATCGGC GAGGTCATGC TCGACGAGCG GCAGATGCAG
GTCAGCGTCG GCGGCAAGCC GGTCTCGCTG TCGCCGCTGG AATATCGGCT GGCGTCCTAT
CTGGTGCTGC ATCGCGGCCG GGTGGTGTCG CAATACGAAC TTGCCGAGAA CATCTACGGC
CAGGACGACG CCCACGATTC CAACGCCATC GAGGTGCTGG TCGGCCGGGT TCGCCGCAAG
ATCGGCGCCG ACCTGATCGA GACCCGGCGC GGCTTCGGCT ACATCGTGCC GGACGAGCGT
TCATGA
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| Protein sequence | MRVLVVEDDS RIASELARGL GEAGYLAEIV GDGEEAWFRG DTEDYAAIIL DLGLPGLDGL
TILKRWRDNG RLTPVLILTA RGSWAERVDG IDAGADDYLP KPFQMEELLA RLRSIVRRSA
GHASSVVTIG EVMLDERQMQ VSVGGKPVSL SPLEYRLASY LVLHRGRVVS QYELAENIYG
QDDAHDSNAI EVLVGRVRRK IGADLIETRR GFGYIVPDER S
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