| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5301 |
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| Symbol | |
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| ID | 6413002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5720670 |
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| End bp | 5722355 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642715190 |
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| Product | hypothetical protein |
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| Protein accession | YP_001994262 |
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| Protein GI | 192293657 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGAA TCCTTGTTAC CGTAGTCACG CTCGTGGCGG TCATCCCTCC GGCCGCGGCG
GCCGACATGC CGCGCTTTCC TCCGCTCATG CCCGTTGCGC CGGTGTCGTG GAATTGGACG
GGCCTGTATT GGGGCGCCCA TGTCGGCGGC AGCTTCGGCT CATCGAGCTT CAGCGATCCC
GCTGGCCCCG CTCTCTACGG CGGCAGCGTC CGCAGCCCGG CTGCGCTGGC AGGCATCCAG
ATCGGCTACA ACTATCAGCC GAACGCGAAT TGGCTGATCG GCGTCGAGGC CGATCTCAGT
TCGATGAACG CCAAGGGCAC CAACACTTGC ATGGCGTCGT CGGGGTTGTT CATTTCGTCC
AATTGCCGCG TCCGCCAGGA TGCGCTGGCG ACGCTGACCG GCCGTGCCGG CTTCGTCGCC
GGTCCCGGCG GCCGCACGCT GCTCTACGCC AAAGGCGGCG CGGCTTTCCT GAGTGAACGG
CTCGACATCG CCGTCGGCTA TCCGCTCGGC AACTCGACCG ACGTCAACGA CGGTCGGTGG
GGCTGGACCG TCGGTGCCGG CATCGAACGG GCGCTGGCGC CGGCCTGGTC GGTGAAGCTC
GAATACAACT ACGCCGATTT CGGCAGCCGC GACATGGCGA CACCGGACAG CGAACGGCTG
GTGCCGGGCG TCGGTTCTTT CGCCACGCCG CAGGGCAGGA GCAGGGTCGA GCAGGACCTG
CATGCGGTGA AGGTCGGCCT CAACCTCAAA TTCGGCGGCG ATGTCGACGC ACGCTTCGAC
GACTATCATC TGCGCGGCAC CCAGGCCGGG GTCGATGTCG TCGAGCGCGG CGCGGTCGAG
GTCGGCGGTC GCGTCTGGTA TAGTTCGGGT CGTTTCCAGA AAGATCTCGG CGGCACATTC
GATCAGGGCA ATCAGAATTT CCTGATCTCG CGGTTGACCT ATCAAAATAC CGCTGTGTCG
GGGGAGGCTT TCGGTCGTAT CGAAGGTCCC TACGACACCT TCCTCAAGGG CTTTGCCGGC
GGCGGCACGC TATTGAGTGG ACATATGAAC GACGAGGACT GGATCGCCTC CGACGGCATC
CCCTATTCGA ATACGCTGTC GGATCCGGTT AGGGGCAGCA TCGCCTATGC GACTGTGGAT
GTCGGCTACA ATCTGGTGCA CGGGCCGGAC TACAAATTCG GCGGCTTCGT CGGTTACAAT
TATTATCGCG AGAACAAATC GGCCTATGGC TGCGTGCAGA CGGCAGGCGC CACGTCGCTG
GTCTGCGCGC AACCGATTTC GGATGCAGTT CTCGCCATCA CCCAGAACGA CACCTGGCAT
TCGTTGCGGG TCGGCCTCAA CGGTGAGATC GGGCTCGGTC GTGGGGTCAA GCTCTCGGCG
GATGCGGCCT ATCTGCCGTA TGTGAAGACC TTCGGAACCG ATACGCATCT GCTGCGGACC
GACGTCGCCG ACAAAGTGTC GCCGTCACAG GGCACGGGGC AGGGCGTCCA GCTCGAAGCC
ATCCTGTCGT ATCAGTTGAA CAGCGCTTTC AGCATTGGCG CCGGTGCGCG GTATTGGGCG
ATGTGGGCGA CCACCAACGC CTACACCAAT ATCTTCGGCA CGGAGTGTCC CTGTCAGACC
CAGCCGGCGC GCACCGAGCG CTATGGAACC TTTTTGCAAG CGGCTTATAA GTTCGACAGC
CTCTAA
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| Protein sequence | MSRILVTVVT LVAVIPPAAA ADMPRFPPLM PVAPVSWNWT GLYWGAHVGG SFGSSSFSDP
AGPALYGGSV RSPAALAGIQ IGYNYQPNAN WLIGVEADLS SMNAKGTNTC MASSGLFISS
NCRVRQDALA TLTGRAGFVA GPGGRTLLYA KGGAAFLSER LDIAVGYPLG NSTDVNDGRW
GWTVGAGIER ALAPAWSVKL EYNYADFGSR DMATPDSERL VPGVGSFATP QGRSRVEQDL
HAVKVGLNLK FGGDVDARFD DYHLRGTQAG VDVVERGAVE VGGRVWYSSG RFQKDLGGTF
DQGNQNFLIS RLTYQNTAVS GEAFGRIEGP YDTFLKGFAG GGTLLSGHMN DEDWIASDGI
PYSNTLSDPV RGSIAYATVD VGYNLVHGPD YKFGGFVGYN YYRENKSAYG CVQTAGATSL
VCAQPISDAV LAITQNDTWH SLRVGLNGEI GLGRGVKLSA DAAYLPYVKT FGTDTHLLRT
DVADKVSPSQ GTGQGVQLEA ILSYQLNSAF SIGAGARYWA MWATTNAYTN IFGTECPCQT
QPARTERYGT FLQAAYKFDS L
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