| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5294 |
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| Symbol | |
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| ID | 6412995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5711582 |
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| End bp | 5712802 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642715183 |
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| Product | putative ABC-type branched-chain amino acid transporter, periplasmic binding protein |
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| Protein accession | YP_001994255 |
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| Protein GI | 192293650 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCATTC GCACCTCGCT CCTCCTGGCC AGCGCCGTCG CGCTCGCTGC AGCTCAGCCC
GCGTTCGCCC AGAAGCAATA CGGCCCCGGC GTCACCGACA CCGAGATCAA GATCGGCCAG
ACCATGCCGT ATAGCGGCCC GGCTTCGGCC TATGGCGTGC AGGGCCACGT CGAAGACGCG
TACTACACGA TGGTCAACGC CAAAGGCGGC GTGAACGGCC GCAAGATCAA GCTGATCAGC
CTCGACGACG CCTATTCGCC ACCCAAGACG GTCGAGCAGA CCCGCAAGCT GGTCGAACAG
GAGGAGGTGC TGGCGATCAT CGGCACCATC GGCACCCCGA CCAACACGGC GATCCAGAAG
TATCTCAACG CCAAGAAAGT GCCGCAGATC TTCATCTCGA CCGGCGCGGC GAAGTGGGAC
GATCCGAAGA ACTTTCCGTG GACCACGCAG CTCTACCCGC CCTACCAGAT GGAGGGCATG
ATTTTCGCCA AGTACCTGCT GAAGAACAAA CCGGACGCCA AGCTCGGCGT ATTCTCGCAG
AATGACGACG CCGGCAAGGA CTACGTCAAA GGCCTGAAGG ACGGGCTCGG CGACAAGGCC
AAGACCATGA TCGTCAAGGA AGTGACCTAT GAGGTCACCG ATCCGACGGT CGACTCGCAG
ATCGTGGCGC TGAAGGCGTC CGGCGCCGAC ACGCTGTTCA CGATGGCGAC GCCGAAGTTC
GGCGCGCAGG CGATCCGCAA GGTGCACGAA CTGAACTGGA AGCCGCTGAA CTTCGTCGTC
AGCGTGTCGA GCTCGATCAA GGGTGTGCTC GAGCCCGCCG GCAAGGAAGC CTCGACCGGC
CTCCTGACCG CACTGGCGGC GAAGACGCCG ACCGACCCGC GGTTCGAGAA CGATGCCGAC
GTCAAGGAGT TCAAGGACTT CCTCGCCAAG TGGTATCCGA AAGGCGACAT CGCCGACGGC
TCCACCGTCA CCGGCTACAT CTCGGCCTAT ATGACCGTGA AGGTGCTGGA AGCCTGCGGC
GACAACCTGA CCCGCGACAA CCTGCTGAAG CAGGCGACCA ACATCAAGCC GACCGCGGCG
CCGCTGCTGC TGCCGGGCAT CAAGATCTCG ACCCGCCCCG ACCGCTACGC GCCCTACACC
CAGATGCAGA TCGCGCGGTT CGACGGAAAG AGCTGGGTGC CGGAAGGCGA AGTGTTCAAC
ACCGATGCGG CGAGCCAATA A
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| Protein sequence | MSIRTSLLLA SAVALAAAQP AFAQKQYGPG VTDTEIKIGQ TMPYSGPASA YGVQGHVEDA
YYTMVNAKGG VNGRKIKLIS LDDAYSPPKT VEQTRKLVEQ EEVLAIIGTI GTPTNTAIQK
YLNAKKVPQI FISTGAAKWD DPKNFPWTTQ LYPPYQMEGM IFAKYLLKNK PDAKLGVFSQ
NDDAGKDYVK GLKDGLGDKA KTMIVKEVTY EVTDPTVDSQ IVALKASGAD TLFTMATPKF
GAQAIRKVHE LNWKPLNFVV SVSSSIKGVL EPAGKEASTG LLTALAAKTP TDPRFENDAD
VKEFKDFLAK WYPKGDIADG STVTGYISAY MTVKVLEACG DNLTRDNLLK QATNIKPTAA
PLLLPGIKIS TRPDRYAPYT QMQIARFDGK SWVPEGEVFN TDAASQ
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