| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5285 |
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| Symbol | |
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| ID | 6412986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5701469 |
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| End bp | 5702653 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715175 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001994247 |
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| Protein GI | 192293642 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.244143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC TCGATACATT CCGCGCCGAG ACCCGCGCCT GGCTGGAGGC GAATTGCCCC
GCCGAGATGC GCACGCCGAT GCAGGGCGAC GAGGACAATT TCTGGGGCGG CCGCAACGCC
AAATTCGCCT CCGAGGCGCA GAAGGTCTGG TTCGAGCGGA TGCGCGACAA GGGCTGGACG
GTGCCAGACT GGCCGACGCA ATACGGCGGC GGCGGGCTCG ACGGCGCTCG CCACAAGATC
CTGCGTGAAG AGATGGCGGC GATCGGGGCC CGCTCTCCGC TGTCCTCGTT CGGCATCTGG
ATGCTCGGGC CGGCGTTGTT GAAATACGGC AACGAGCAGC AGAAGGCTGA GCATCTGCCG
AAGATCGCGC GCGGCGAAAT CCGCTGGTGC CAGGGCTATT CCGAGCCGAA CGCAGGCTCC
GACCTCGCCT CGCTGCAGAC CCGCGCCGAG AGCGACGGCG ACGACTTCAT CATCAATGGT
TCGAAGATCT GGACGTCTTA CGCCAACTAC GCGGACTGGA TCTTCTGCCT GGTGCGGACC
GATCCGAGCG CCAAGAAGCA TGACGGCATC AGCTTCATCC TGTTCGACAT GACTTCGAAG
GGCGTGACGA CCAAGCCGAT CCTGCTGATC TCCGGCAAGT CGCCGTTCTG CGAGACCTTC
TTCGACAACG TCCGGGTGCC GAAGTCGCAC GTCGTCGGCA CCATCAACCG CGGCTGGGAT
GTGGCGAAGT ATCTGCTGCA GCACGAGCGC GCGATGATCT CTGGCATGGG CGGCCGCGAC
GGCGGCCGGC CGCTCGGTCA GGTCGCGGCG GATTCGCTCG GCTCCGACGA TCAGGGCCGG
CTCGACGATC CGATCCTGCG CGGCCAGATC GCCACCTTCG ATGTCGACGA GGCGGCGCTG
GCCTGCGCGG CGGAGCGGGC GGTCGATCTC GCCAAGGCCG GACAACTGCA CCCGGCGTTC
TCGTCGGCGA TGAAGTACTA CGGCACCGAG CTGAACAAGC GCCGTCACGA GATCCTGATG
TCGGCCGGCG GCATCGATGC GCTGGAGTGG GAGAGCGAGC GCAGCCAGGA AGGCGCCCGC
GCCCGTGCCT GGCTGCGCAC CAAGGCCAAC TCGATCGAAG GCGGCACCAG CGAAGTGATG
CTCGGCATCG TCGCCAAGCG CATTCTTGAT CTACCGGGGG CGTAG
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| Protein sequence | MTDLDTFRAE TRAWLEANCP AEMRTPMQGD EDNFWGGRNA KFASEAQKVW FERMRDKGWT
VPDWPTQYGG GGLDGARHKI LREEMAAIGA RSPLSSFGIW MLGPALLKYG NEQQKAEHLP
KIARGEIRWC QGYSEPNAGS DLASLQTRAE SDGDDFIING SKIWTSYANY ADWIFCLVRT
DPSAKKHDGI SFILFDMTSK GVTTKPILLI SGKSPFCETF FDNVRVPKSH VVGTINRGWD
VAKYLLQHER AMISGMGGRD GGRPLGQVAA DSLGSDDQGR LDDPILRGQI ATFDVDEAAL
ACAAERAVDL AKAGQLHPAF SSAMKYYGTE LNKRRHEILM SAGGIDALEW ESERSQEGAR
ARAWLRTKAN SIEGGTSEVM LGIVAKRILD LPGA
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