| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5268 |
|---|
| Symbol | |
|---|
| ID | 6412969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5681901 |
|---|
| End bp | 5682935 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642715158 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001994230 |
|---|
| Protein GI | 192293625 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCG CAATACGCAG AACGATCGAA GTTCTGCGCG AGAAGCAAAT CCTGCACAAA
CTCGGTGTTG CGGTCAGCAT CGCGGTCATC GCGGCCGCTT GCTACGTTCT GTACCACATC
CTGCGCGGCA TCGACCACGA TCGCGTGCTC GACGCGATGG GACAGACCGA GCCGACCTCG
ATTGCGCTCG CCGCATTGTT CGTGGCCGCC GGCTATTTCA CCCTGACGTT TTACGATCTG
TTCGCCGTTC ATGCGATCGG TCGCGACGAC GTGCCTTATC GGGTCAACGC ACTCGCCGCC
TTCACCAGCT ATTCGATCGG CCACAATGTC GGCGCCAGCG CGCTGACCGG CGGCGCGGTG
CGCTACCGGA TCTACTCGGC CTGGGGGCTG GACGCGATCG ACGTCGCCAA GGTGTGCTTC
CTGGCCGGCC TGACGTTCTG GCTCGGCAAC GCGGCAGTGC TCGGGCTGGG CGTCGCCTAT
CATCCCGAGG CGGCGTCCGC GGTCGACCTG TTGCCGCCGG CGGTCAACCG CGTGCTGGCG
CTGCTGATCC TCGCCGGCCT GATGGTCTAT GTCGCGTGGG TGTCGTTCAA GCCGCGCTGC
GTCGGGCGCG GCAGTTGGAC GGTAACGCTG CCCGGCGGCA AGCTGACGCT GCTGCAGATT
GCGATCGGCA TCGTCGATCT CGGCTTCTGC GCGCTCGCGA TGTACGTGCT GACACCCGAC
GAGCCCAATG TCGGATTCGT CGTGGTTGCG GTGATCTTCG TGTCGGCGAC GCTGCTCGGC
TTCGCCAGCC ATTCGCCCGG CGGGCTCGGC GTGTTCGACG CCGCGATGCT GGTCGGGCTG
TGGCAGATGG ACAAGGAAGA GCTGCTTGCC GGCATGCTGC TGTTCCGCCT GCTGTACTAC
ATCGTGCCGT TCGTGATATC GGTCCTCGTG CTTGCGGTCC GGGAGATCGT GCTCGGTGCG
CGGCTGAAGC GGGTTCCTCC GCTGGCCGAA GCGCTGAAGC CGAAACCGGT GCGCGGAGAT
CCCTCACCAG GTTGA
|
|---|
| Protein sequence | MRIAIRRTIE VLREKQILHK LGVAVSIAVI AAACYVLYHI LRGIDHDRVL DAMGQTEPTS
IALAALFVAA GYFTLTFYDL FAVHAIGRDD VPYRVNALAA FTSYSIGHNV GASALTGGAV
RYRIYSAWGL DAIDVAKVCF LAGLTFWLGN AAVLGLGVAY HPEAASAVDL LPPAVNRVLA
LLILAGLMVY VAWVSFKPRC VGRGSWTVTL PGGKLTLLQI AIGIVDLGFC ALAMYVLTPD
EPNVGFVVVA VIFVSATLLG FASHSPGGLG VFDAAMLVGL WQMDKEELLA GMLLFRLLYY
IVPFVISVLV LAVREIVLGA RLKRVPPLAE ALKPKPVRGD PSPG
|
|---|
| |