Gene Rpal_5244 details

Gene Information

• Locus tag: Rpal_5244
• ID: 6412944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 5655187
• End bp: 5655720
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642715133
• Product: hypothetical protein
• Protein accession: YP_001994206
• Protein GI: 192293601

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAGA TCTTCAAGGT GTATCAGGAC GCGGCCAAGG CGCAGGCGGC GGTGGCGGAG 
CTGAAGGCCG CTTCGTTCAG CAACGCCGCG ATCGTCTCCA GCGACAAGGA CGGTACCCTG 
GTCACGGTCG ACCCGCCGTT CGGCAAGGGT GGCCAGGCTG ACGCGATCCT CAACCGCCAC 
GGCGCGATCC GCGACGTCTC CGCCCGTCAT GGCAGCGGTG CCTCGCTGGC GGATTCCTCC 
ACCCGTCTGA CCGGCGCGCC GCGGCTGACC GACTCCCGCA CCACTCTGGG CTCGATCTTC 
CCGGAGCTGA CCAGCTCGAA CTTCTTCCTG TCGTCGATGT TCGGCCCGCT GCTGTCGGCG 
TCGCAGAAGC CGTGGTCCTC GCTCGCCGCA AGCCAGAAGC CGTGGTCCTC GCTGACCAAG 
AATCAGGATG CCTGGTCGTC GCTGGCCAGC AATCAGAAGG GTTCGGCCCA GCTGATCAAC 
AATCCGGCGC TGTTCTCGTC GATGCTCGGC CTGCCGGTGC TGGCCGGTCG TTAA 

 

Protein sequence

MTQIFKVYQD AAKAQAAVAE LKAASFSNAA IVSSDKDGTL VTVDPPFGKG GQADAILNRH 
GAIRDVSARH GSGASLADSS TRLTGAPRLT DSRTTLGSIF PELTSSNFFL SSMFGPLLSA 
SQKPWSSLAA SQKPWSSLTK NQDAWSSLAS NQKGSAQLIN NPALFSSMLG LPVLAGR