Gene Rpal_5232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5232 
Symbol 
ID6412932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5643633 
End bp5644382 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID642715122 
ProductElectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001994195 
Protein GI192293590 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0937638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTC TGGTGCCGGT CAAGCGCGTG GTCGACTACA ACGTCAAGAT CCGCGTCAAG 
AGCGACGGGT CGGGCGTTGA ACTCGCCAAC GTCAAGATGT CGATGAATCC GTTCGACGAG
ATCGCCGTCG AAGAAGCGCT GCGCCTCAAA GAGGCCGGCA AGGCGACCGA AGTCGTCGTG
GTCTCGATCG GACCGGCGCA GGCGTCGGAA ACCCTGCGCA CCGGCCTCGC CATGGGCGCG
GACCGCGGCA TCCTGGTCAA GGTCGACGGC GTCGTCGAAC CGCTGGCGGT CGCCAAGATC
CTCAAGGGCA TCGCCGACGA GGAAAAACCG GGACTGATCA TTCTCGGTAA GCAGGCGATC
GACGACGACA GCAACCAGAC CGGCCAGATG CTGGCCGCGC TGCTCGGCTG GGCGCAGGCG
ACCTTCGCCT CCAAGCTCGA AGTCGAAGGC TCGGACTTCA CCGTCGCGCG TGAAGTCGAT
GGTGGCTCGC AGACCGTCAA GCTCAAGGGC CCGGCGATCG TCACCACCGA TCTGCGTCTC
AACGAGCCGC GCTACGCTTC GCTGCCGAAC ATCATGAAGG CCAAGAAGAA GCCGATCGCG
GAGAAGACCG CGGCCGACTA CGGCGTCGAC GTTTCGCCGC GCCTGGAAGT TCTGAAGACC
GTCGAGCCGG GTGGCCGCAA GGCCGGCGTC AAGGTCAAGG ACGTCGCCGA ACTGGTTTCG
AAGCTCAAGA ACGAGGCGGG TGTACTCTGA
 
Protein sequence
MKVLVPVKRV VDYNVKIRVK SDGSGVELAN VKMSMNPFDE IAVEEALRLK EAGKATEVVV 
VSIGPAQASE TLRTGLAMGA DRGILVKVDG VVEPLAVAKI LKGIADEEKP GLIILGKQAI
DDDSNQTGQM LAALLGWAQA TFASKLEVEG SDFTVAREVD GGSQTVKLKG PAIVTTDLRL
NEPRYASLPN IMKAKKKPIA EKTAADYGVD VSPRLEVLKT VEPGGRKAGV KVKDVAELVS
KLKNEAGVL