Gene Rpal_5214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5214 
Symbol 
ID6412914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5626643 
End bp5627221 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID642715104 
ProductChaC family protein 
Protein accessionYP_001994177 
Protein GI192293572 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.608281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA AAACACTCTC CGAACACGAA CTGACCGCCG GCGACCTTTG GGTGTTCGGC 
TATGGCTCGC TGATGTGGAA TCCCGGCTTC GACTTCGTCG AGCGGGTGCC GGCGCGGCTG
ATCGGCGAGC ACCGGGCGTT GTGCGTGTAT TCGTTCGTGC ATCGCGGCAC GCCGGAACAG
CCGGGGCTGG TGCTCGGGCT CGACCGCGGC GGCGCCTGCC GCGGCATCGC GTTCCGCGTC
GCCGATGCGC AGCGGATGGC GACGGTCGCT TACTTGCGCG AGCGCGAACA GGTCACCAGC
GTGTATCGCG AGGTCAAGCG CTCGGTGTGG CTGGAGGACG ACGCCCGGCG ACGGATCAGC
GCGCTGACCT ATGTGGTCGA CCGTGGCCAC GCACAATATG CCGGCCGGCT GTCCTACGCC
GAACAGCTTC GTCATGTGCG CCAGGGTCAC GGCCGCTCCG GGCCGAACCG CGATTACGTG
ATCGCCACCG TGAAGGCGCT GGAAACACAA GGCTGCCGCG ACGTGCCGCT GCACCAGCTC
GCCGAAGCGC TGCGCGACGA AGCGCCGGCG CCGCGCTGA
 
Protein sequence
MSTKTLSEHE LTAGDLWVFG YGSLMWNPGF DFVERVPARL IGEHRALCVY SFVHRGTPEQ 
PGLVLGLDRG GACRGIAFRV ADAQRMATVA YLREREQVTS VYREVKRSVW LEDDARRRIS
ALTYVVDRGH AQYAGRLSYA EQLRHVRQGH GRSGPNRDYV IATVKALETQ GCRDVPLHQL
AEALRDEAPA PR