Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5214 |
Symbol | |
ID | 6412914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5626643 |
End bp | 5627221 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642715104 |
Product | ChaC family protein |
Protein accession | YP_001994177 |
Protein GI | 192293572 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.608281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCA AAACACTCTC CGAACACGAA CTGACCGCCG GCGACCTTTG GGTGTTCGGC TATGGCTCGC TGATGTGGAA TCCCGGCTTC GACTTCGTCG AGCGGGTGCC GGCGCGGCTG ATCGGCGAGC ACCGGGCGTT GTGCGTGTAT TCGTTCGTGC ATCGCGGCAC GCCGGAACAG CCGGGGCTGG TGCTCGGGCT CGACCGCGGC GGCGCCTGCC GCGGCATCGC GTTCCGCGTC GCCGATGCGC AGCGGATGGC GACGGTCGCT TACTTGCGCG AGCGCGAACA GGTCACCAGC GTGTATCGCG AGGTCAAGCG CTCGGTGTGG CTGGAGGACG ACGCCCGGCG ACGGATCAGC GCGCTGACCT ATGTGGTCGA CCGTGGCCAC GCACAATATG CCGGCCGGCT GTCCTACGCC GAACAGCTTC GTCATGTGCG CCAGGGTCAC GGCCGCTCCG GGCCGAACCG CGATTACGTG ATCGCCACCG TGAAGGCGCT GGAAACACAA GGCTGCCGCG ACGTGCCGCT GCACCAGCTC GCCGAAGCGC TGCGCGACGA AGCGCCGGCG CCGCGCTGA
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Protein sequence | MSTKTLSEHE LTAGDLWVFG YGSLMWNPGF DFVERVPARL IGEHRALCVY SFVHRGTPEQ PGLVLGLDRG GACRGIAFRV ADAQRMATVA YLREREQVTS VYREVKRSVW LEDDARRRIS ALTYVVDRGH AQYAGRLSYA EQLRHVRQGH GRSGPNRDYV IATVKALETQ GCRDVPLHQL AEALRDEAPA PR
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