| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5176 |
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| Symbol | |
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| ID | 6412876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5580337 |
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| End bp | 5581239 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715066 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001994139 |
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| Protein GI | 192293534 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCA AGCAGCTCGA ATATTTCATG CACGTCGCCG AGCTTGGCTC GTTCAGCAAG
GCCGCGATGG TGCTGGATGT CGCCCAGCCG GCGCTGAGCC GGCAGGTGCG CGGGCTGGAG
ACGGAATTGC GCCAGCAATT GTTCCTGCGC AACGGCCGTG GCGTTGCGCT GACCGAGGCC
GGACGCCGGC TGTTCGATCA CTCCGTCGCC ATCATGCAGA TGGTCGCACA TGCCCGCGAA
GACCTCGGCG CCAGCCGCGA CGCGCCGGTC GGCCGCGTCA CCATCGGGCT GCCGCCGTCG
ATCGCGCGCC AATTGACGCT ACCGCTGATC GACCACTTCA AGCGCACCCT GCCGTCGGCA
CGGCTGGCGA TTGTCGAAGG CCTGTCGTCG CACATCATCG AATGGGTCAC CACCGGCCGC
GCCGATGTCG GCCTCGTCTA CAATCCAGAC GCGCAACCGG GCATCGAGAT CACGCCGTTG
CTGCAGGAGC CGCTCGGGCT GGTGAGCTAC GCGCCACCCA GCAAGCGCCG CGGCGCAGCG
GCTCCGCTGC CGTTCAAGGA ACTATCGAAA TATCCGCTGA TCGTTCCCGA ACGGGTGCAT
GCGATGCGCC GGCTGCTGGA GAACGAGGCG GCGCTGGCCG GCGTCAAGCT CGACATCGCC
TGGGAAGTGT CGAGCGTGCC CTCGATCATC GAACTGGTCT GCGCCGGCTA CGGCCACGCG
GTGCTGACGC GAAGCGGGGT CGCTGCATCG CCGCGGGCGG CCGAGCTGGT TATGCGTCCG
CTGATCCAAC CCGCGCCGGC GAGCGCGCTC TGCCTCGTCG TGTCCGCGAC GCGGCGGCCG
ACGCCGCTGG CGCAGCACAG CATGCGCATG CTGACCGACT TGGTGCGGAC GCTGCCGACC
TGA
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| Protein sequence | MNLKQLEYFM HVAELGSFSK AAMVLDVAQP ALSRQVRGLE TELRQQLFLR NGRGVALTEA
GRRLFDHSVA IMQMVAHARE DLGASRDAPV GRVTIGLPPS IARQLTLPLI DHFKRTLPSA
RLAIVEGLSS HIIEWVTTGR ADVGLVYNPD AQPGIEITPL LQEPLGLVSY APPSKRRGAA
APLPFKELSK YPLIVPERVH AMRRLLENEA ALAGVKLDIA WEVSSVPSII ELVCAGYGHA
VLTRSGVAAS PRAAELVMRP LIQPAPASAL CLVVSATRRP TPLAQHSMRM LTDLVRTLPT
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