| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5154 |
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| Symbol | |
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| ID | 6412854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5552732 |
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| End bp | 5553685 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715044 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001994117 |
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| Protein GI | 192293512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.692962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG GCTTCGCCTC CACGACCGAC CTCGCCGAGA AGAAGGTGAC GTTTTCCGAG
ATCGGCCCCG ATCTCTATGC GTTCACGGCG GAGGGCGATC CGAATTCGGC GGTGATCGTC
GGCGACGACG GCTGTCTGGT GTTCGACGCG CAGGCCACTC CGGCGATGGC CGGCAAGGTG
ATCGAGCGCG TCCGCAGCGT CACCGACAAG CCGATCAAAT ACGTGGTGCT GTCGCACTAT
CATGCGGTGC GCGTACTGGG AGCGTCGGCC TATCAGGCGG AAGGCATCAT CGCGTCGCAG
GAAACCTATC GGCTGATCGA GGAGCGCGGC CAGCAGGATT GGGATTCGGA ATACGGCCGG
TTCCCGCGGC TGTTCCAGGA CGCCGAGAGC ATTCCCGGCC TGACCTGGCC GACGCTGGCA
TTCGACGGCG AGATGTCGGT GTTCCTGGGC AAGCGAGAGG TGCGGCTGAT GCAGCTCGGC
GCCGGCCACA CCTCCGGTGA TATCGTCGCC TGGGTGCCGG ATGCGCAGGT GATGCTCACT
GGCGACCTCG TCGAGTATCA CTCGGCCTGC TATTGCGGCG ACGCGTATTT GCGCGAATGG
CCGGCGACGC TGAACGAAAT CCGCGAGTTC AATCCAAAGG CGATCGCGCC CGGCCGCGGC
GACGCGCTGA AGGGGCTGGA GACCACGCGT GAAGCGATCG CGATGACCCG CGACTTCGTC
GGCACGCTGT ACGGCGCCGC CGAGCTCTCG GTCGCCAAGG GCCGTAGCCT GAAGGAGACC
TGGGACGCCA CCCGCGAGGT GATGGACCCG AAGTTCTCGT CCTTCGCGAT CTACGAGCAC
TGCCTGCCGT TCAACGTCTC GCGCGCGTTC GACGAAGCCT CGGGCATCGA CGATCCGGTG
ATCTGGACCG CCGAGCGCGA CCGCGAAATG TGGGCCGCCC TGCAGGGCGG CTAG
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| Protein sequence | MAKGFASTTD LAEKKVTFSE IGPDLYAFTA EGDPNSAVIV GDDGCLVFDA QATPAMAGKV
IERVRSVTDK PIKYVVLSHY HAVRVLGASA YQAEGIIASQ ETYRLIEERG QQDWDSEYGR
FPRLFQDAES IPGLTWPTLA FDGEMSVFLG KREVRLMQLG AGHTSGDIVA WVPDAQVMLT
GDLVEYHSAC YCGDAYLREW PATLNEIREF NPKAIAPGRG DALKGLETTR EAIAMTRDFV
GTLYGAAELS VAKGRSLKET WDATREVMDP KFSSFAIYEH CLPFNVSRAF DEASGIDDPV
IWTAERDREM WAALQGG
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