| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5139 |
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| Symbol | |
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| ID | 6412833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5526248 |
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| End bp | 5527234 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642715023 |
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| Product | quinone oxidoreductase, YhdH/YhfP family |
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| Protein accession | YP_001994102 |
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| Protein GI | 192293497 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCACGT TCAAGGCTGT CCGGATCGAC AAGGCGGACA AAGGGACCAG CGCTGCGCTG
ACGCAATTCG ACGAAGCCGA GCTGATGGAC GGCGACGTCA CTGTCCGGGT CGAATGGTCG
ACGTTGAACT ACAAGGATGG TCTGGCGCTG ACCGGCAAAT CGCCGGTGGT GCGGCGTTTC
CCGATGATCG CCGGCATCGA CTTCGCCGGC ACCGTCGAGA CCTCGACCAA TCCGAACTGG
AAGCCGGGCG ACAAGGTAAT CGCCAACGGC TGGGGCATGG GGGAGACGCA TCTCGGCGCC
TATGCGGAGA AGGCGCGCGT CAAGGGCGAC TGGCTGGTGC GGCTGCCCGA AGGCATGACC
GCGCGACAGG CGATGGCGAT CGGCACTGCA GGCTACACCG CGATGCTGTC GGTGCTGGCG
CTGGAGAACC ATGGCTTGAA GCCTGCCGAC GGTCCAGTGA TCGTCACGGG CGCCGCGGGC
GGCGTCGGCT CGGTCGCGAT CGCGCTCTTA TCGAAGCTCG GTTATCACGT GATCGCCTCG
ACCGGCCGGA TGTCGGAAGA GAGCTATCTG AAGAGCCTCG GCGCCGCCGA GATCATCGAC
CGCAACGAGC TTTCCGGACC GGCAAAGCCG CTCGCCAAGG AGCGTTGGGT CGGCGGCGTC
GACAGCGTCG GCTCGACGAC TCTGGCAAAC CTGCTGGCGA TGACCAAGTA TCGCGGCGCG
ATCGCGGCCT GCGGTCTCGC CGGCGGCATG GATCTGCCGT CGTCGGTCGC GCCGTTCATT
CTGCGCGGTG TCTCGCTGCT CGGCATCGAC TCGGTGATGT GCCCGATCGA ACTGCGCAAG
CAGGCATGGG CCCGGCTGGC GACCGATCTC GATGCCGGCA AGCTGTCCGA CATGACGCAG
GAGGTTTCGC TCGATCAAGT GATCGACGCC GGCACCAAGC TGCTCGCCGG CCAGGTCCGC
GGCCGCACGG TGGTGAAGAT CAGCTGA
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| Protein sequence | MATFKAVRID KADKGTSAAL TQFDEAELMD GDVTVRVEWS TLNYKDGLAL TGKSPVVRRF
PMIAGIDFAG TVETSTNPNW KPGDKVIANG WGMGETHLGA YAEKARVKGD WLVRLPEGMT
ARQAMAIGTA GYTAMLSVLA LENHGLKPAD GPVIVTGAAG GVGSVAIALL SKLGYHVIAS
TGRMSEESYL KSLGAAEIID RNELSGPAKP LAKERWVGGV DSVGSTTLAN LLAMTKYRGA
IAACGLAGGM DLPSSVAPFI LRGVSLLGID SVMCPIELRK QAWARLATDL DAGKLSDMTQ
EVSLDQVIDA GTKLLAGQVR GRTVVKIS
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