Gene Rpal_5093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5093 
Symbol 
ID6412787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5479166 
End bp5479477 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content64% 
IMG OID642714978 
Productferredoxin III, nif-specific 
Protein accessionYP_001994057 
Protein GI192293452 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR02936] ferredoxin III, nif-specific 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCT TCTCCACCCG CGACGGCAAG CCGTGGGAAC CGACCTACCT CACCGCGATC 
GACGACAAGA AGTGCATCGG CTGCGGCCGC TGTCACAAAG TGTGCTCGCG CGACGTGATG
CATCTGATGG GCGTCAACGA GGACGGCGAA CTGGTCGCCT GCTCGCTCGA CGACGATGAT
GACGACGAGG AATTCGTCCG CAAGGTGATG GTGCTCGACG CGGCCGGCAA TTGCATCGGC
TGCTCGGCTT GCGTCCGGGT CTGCCCGAAG GCGTGCCAGA CCCACGTCAA GGCCAGCGAA
CTCGGGCTCT AA
 
Protein sequence
MAIFSTRDGK PWEPTYLTAI DDKKCIGCGR CHKVCSRDVM HLMGVNEDGE LVACSLDDDD 
DDEEFVRKVM VLDAAGNCIG CSACVRVCPK ACQTHVKASE LGL