| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5090 |
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| Symbol | |
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| ID | 6412784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5476822 |
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| End bp | 5477808 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714975 |
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| Product | Fe-S cluster assembly protein NifU |
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| Protein accession | YP_001994054 |
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| Protein GI | 192293449 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGTC TCGGCAAGTT TGACCATCAC TTCTCTACCT CCGCTAACGC TGGTCCGCTG
CCGCAGGCCA ATGCGGTCGG CCGGTTCGGC AGCATCGGCT GGGGCGATGC CGTCAAGTTG
ATGTTGAAGG TCGAGCCCGA CGACGGGCGG ATCGCGCAGG CCCGCTTCCA AGCGTTCGGC
TGTAGCTCGG CGATCGCCGC CTCTGCGGCG CTCACCGACA TGATCACCGG CAAGACCATC
GACGAAGCCA GCGGCATCAG CGCCGCGGCG ATCGCTGACT ACCTGGGCGA CCTGCCGCGT
GAGCGGATGT ATTGCGCGGT GATGACTTTC GAGGCCCTGC AGCAGGCGAT TGGTTCGTTT
CGCGGCAAGG CCGCAGTGGC CGAGGCCGAT GCGCCGCCGG CCTGCAAGTG CCTCGGCGTC
GGCCAGATGA TGATCGAGCG CACCATTCGC TTCAACCGGC TGACCAGCCT GGACGACGTC
ACCGCCTACA CCAAGGCCGC CGGCAGCTGC AGCACCTGCT TCAAGCAGAT CGAATCCCTG
CTGGCGCGGG TCAACGCCGA GATGGTCGAG GACGGCCTGA TCCCGGCCGA AGACGCCTAC
CGCATCGGCT CGGCGACGCC GCGCGCCACC GAGCTGAAGC CCCATGGCGC GCCGGCTCCG
GCCGCCAACA TCTTTGCCGC CAAGGCCACG CCTGCGCATC TGCGCCCGAT TGCCAAAGCT
GCGCCGCGTC CGGCGACGCC GCCGGCTGGA CTGGTCGATG CGCCGCCGCA GGAGGCGCTG
ATCGCCGAAG CGGTCGAAGA ACTGCGCCCG CATCTGCAGC GTGACGGAGG CGATTGCGAG
TTCGTCAGCC TCGATGGCAA CATTGTCTAT GTCCGGTTGT CCGGCAATTG CGTCGGATGC
CAGCTCTCGT CGGTGACGCT GTCGGGCGTC CAGGCCAAGC TTGTCGAAAA GTTCGGCCGG
CCGCTACGTG TGGTGCCGGT GTCATGA
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| Protein sequence | MLGLGKFDHH FSTSANAGPL PQANAVGRFG SIGWGDAVKL MLKVEPDDGR IAQARFQAFG
CSSAIAASAA LTDMITGKTI DEASGISAAA IADYLGDLPR ERMYCAVMTF EALQQAIGSF
RGKAAVAEAD APPACKCLGV GQMMIERTIR FNRLTSLDDV TAYTKAAGSC STCFKQIESL
LARVNAEMVE DGLIPAEDAY RIGSATPRAT ELKPHGAPAP AANIFAAKAT PAHLRPIAKA
APRPATPPAG LVDAPPQEAL IAEAVEELRP HLQRDGGDCE FVSLDGNIVY VRLSGNCVGC
QLSSVTLSGV QAKLVEKFGR PLRVVPVS
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