| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5089 |
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| Symbol | |
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| ID | 6412783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5475593 |
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| End bp | 5476825 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714974 |
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| Product | cysteine desulfurase NifS |
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| Protein accession | YP_001994053 |
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| Protein GI | 192293448 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGC CGGCAGACAT CGTCTATCTC GACGCCAATG CAACGACGCG GACCGATCCG
CGCGTCGTCG AAGCGATGCT GCCGTACTTC TCGCTGTACT ACGGCAACCC GTCGTCGAAA
TATGGGCTCG GCGGCCATGC TGCGCTCGCC GTCAAGCGAG CGCGCGAGCG CGTTCAGGCG
CTGCTCGGCG CCGCACAGCC GCACGAACTG ATCTTCACCT CGGGTGGTAC CGAGAGCAAC
AACGCCGCAA TCCTGTCCGC GCTCGAAGCG GCGCCGCGTC GGCGCGAAGT GATCATCTCG
GCGGTGGAAC ATCCGGCGGT GCTGTCGCTG TGCGCCTGGC TGGAAAAGAA CAAGGGCATC
CGCGTTCACC TGATCCCGGT CGATCGTCAG GGACGGCTCG ACATTCTGGC CTATCGCGAA
GCGATGTCCG ACCGTGTCGC GATCGCGTCG ATCATGTGGG CCAATAATGA GACCGGTGTG
ATCCAGCCGG TGGCTGATCT CGCCGAGCTC GCCAAGGAGG TCGGCGCGCT GTTTCACACC
GACGCGGTGC AGGCGGTCGG CAAGTGTCCG ATCGATCTGC AGTCGACCAT GATCGACATG
CTGTCGCTGT CCGGACACAA GCTGCACGGC CCGAAGGGCG TCGGCGCGCT GTATGTCCGC
GCCGGCATCC GCTTCAAGCC GCAGATCAAA GGTGGCCAGC AGGAGCGTGG CCGCCGCGCC
GGTACCGAGA ACGTGCCGGG CATCGTCGGT CTCGGCATTG CGGCCGAACT TGCCGCTGGT
GCGATGGCCG ACGAGGACAT TCGGGTGCGT GGCCTGCGCG ACCGGCTCGA ACGCGAGATC
CTGGCGCGGG TCGACCATTG CGTTGCCGTC GGTGCCCGCG CCGAGCGTCT GCCTAATACA
TCGAACATCG CGTTCTCGTT CATCGACAGC GAGGCGATCA TCACGCTGCT GGATCGCGCC
GGCATTGCCG CCTCGATGGG ATCGGCGTGC GCGACCGGCT CGTTCGAGCC GTCGCATGTG
CTGCTGGCTA TGAAAGTCGC AGAGGACGCG GTCCGCGGCG GCGTGCGGTT CTCGCTGTCA
CGCGACAACA CCGACGCCGA CATCGACCGC GCGCTGGAAG TCGTTCCCGC CGTGGTGGCC
AAGCTGCGGG CGATCTCGCC GTTCGGGGTC GATGATGCTC CGCAGGCGGT CGGGCGTTCG
TCTGGAAGTG CGCAAGGAAC AACCCATGTC TGA
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| Protein sequence | MSEPADIVYL DANATTRTDP RVVEAMLPYF SLYYGNPSSK YGLGGHAALA VKRARERVQA
LLGAAQPHEL IFTSGGTESN NAAILSALEA APRRREVIIS AVEHPAVLSL CAWLEKNKGI
RVHLIPVDRQ GRLDILAYRE AMSDRVAIAS IMWANNETGV IQPVADLAEL AKEVGALFHT
DAVQAVGKCP IDLQSTMIDM LSLSGHKLHG PKGVGALYVR AGIRFKPQIK GGQQERGRRA
GTENVPGIVG LGIAAELAAG AMADEDIRVR GLRDRLEREI LARVDHCVAV GARAERLPNT
SNIAFSFIDS EAIITLLDRA GIAASMGSAC ATGSFEPSHV LLAMKVAEDA VRGGVRFSLS
RDNTDADIDR ALEVVPAVVA KLRAISPFGV DDAPQAVGRS SGSAQGTTHV
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