| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5046 |
|---|
| Symbol | |
|---|
| ID | 6412740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5427920 |
|---|
| End bp | 5429116 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642714931 |
|---|
| Product | acetate kinase |
|---|
| Protein accession | YP_001994010 |
|---|
| Protein GI | 192293405 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0282] Acetate kinase |
|---|
| TIGRFAM ID | [TIGR00016] acetate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG TACTGCTGGT CCTTAATGCG GGTTCTTCGA GTATCAAATT CGCGCTGTAT
GAAGCGCACA CCGAGCCGAC CGCGGATCAT CTGATCTGCG AAGGCGGCAT CGGCAGCCTT
GGTCACCGGC CGCATTTCAA GGTGGTGAAC AGCGACGGTT CCACTCGTTA CGACACCTAC
CTGCCGGAAG GCACCAGCCA CGACGACGCG ATGGCGGTGC TGATCGGCTG GATCGAAACG
ACGTTTCCCG AGCACCGGCT GAGTGCGGTC GGCCATCGCG TGGTCCATGG CGGCGCGCTT
TTCGACGGAC CGGTTGATGT GACGCCTGAA GTGATCGCCC AGCTTCGTGC CTTCGACAGG
CTGGCGCCGT TGCATCAGCC GCACAACGTC TCGGCGATCG AGGCGCTGGC CAAGTTGCAT
CCGTCGCTGA CCCAGATCGC GTGTTTCGAT ACCGCGTTCC ATCATCGTCT CCCCGAGGTC
GCCACCGCCT TCGCGCTGCC GCGCGAGCTG ACCGAACAGG GCGTCCGCCG CTACGGCTTT
CACGGGCTCT CTTACGAGTA CATTGCGGGC CGGCTGCCGG ACGTCGCCGG ACAGGCGGTC
GCCGATGGCC GGGTGGTGGT GGCGCATCTC GGCGCCGGTG CCAGCATGTG CGCGATGCTG
AGGTGCCGCA GCATCGCCAC CACGATGGGC TTCACCGCGC TCGACGGCCT GATGATGGGC
AGTCGTTGCG GTGAGCTCGA TCCGGGCGTG GTGCTGTATC TGCTCGAAGA GAAGAGCATG
ACGGCCCGCG AGATCGAAGA TCTGCTGTAT CGCGAGTCCG GGCTGCTTGG CGTCTCCGGC
ATCAGCGACG ACATGCGCAC GCTGCTGGCG AGCGACGATC CGCACGCATG CGAGGCGATC
GAATTGTTCG TCTATCGGAT CGCCCGCGAG CTCGGCTCGC TCGCCGCCGC GCTCGGCGGG
CTCGACGCAC TGGTGTTCAC CGGCGGCATC GGCGAACACG CCTCGGAAAT CCGGCGCCGG
GTGTGCGAGC AGGCGGCCTG GCTCGGTGTG ACGCTCGATC CGGATGCCAA TGCGCGCCTG
TCGGGGGCGG GGCGGATCAG CGCGCCGGAC AGCAAGGTGT CGGCCTGGGC GATCCCGACC
GATGAAGATC TGATGATCGC CCGCCATGTC TGGCGGCTTG CCGACGGCGG GCGTTGA
|
|---|
| Protein sequence | MSDVLLVLNA GSSSIKFALY EAHTEPTADH LICEGGIGSL GHRPHFKVVN SDGSTRYDTY
LPEGTSHDDA MAVLIGWIET TFPEHRLSAV GHRVVHGGAL FDGPVDVTPE VIAQLRAFDR
LAPLHQPHNV SAIEALAKLH PSLTQIACFD TAFHHRLPEV ATAFALPREL TEQGVRRYGF
HGLSYEYIAG RLPDVAGQAV ADGRVVVAHL GAGASMCAML RCRSIATTMG FTALDGLMMG
SRCGELDPGV VLYLLEEKSM TAREIEDLLY RESGLLGVSG ISDDMRTLLA SDDPHACEAI
ELFVYRIARE LGSLAAALGG LDALVFTGGI GEHASEIRRR VCEQAAWLGV TLDPDANARL
SGAGRISAPD SKVSAWAIPT DEDLMIARHV WRLADGGR
|
|---|
| |