| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5045 |
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| Symbol | |
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| ID | 6412739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5426717 |
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| End bp | 5427919 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714930 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001994009 |
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| Protein GI | 192293404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA ACAGCAAGAT CGCGAACGCC GTCTACATCG AATTCGTTCG GTTGCTGTAC
ACCGCGCGCT GGCCCATCGT TGTGGTGGGC TGTGCGATGC TGACCACCGG CCTCGCGGTC
GCCTGGCAGA CCCGCGACGT GGTGATGGCG GTGATCGGAC TCACCGGCAT GGCCGTGACG
CTGGGACGGC TCGCGCTGTG TTTCGCGTTC GACCACGCGG TTGCAAAGCG TCCGCTCGAT
GTCGAAACCG CAAAACGATG GGAACGCCGT CTCGCTGTCG GCGTGATCTC GACCGGCGTC
TGCGTCGGTG CCTTCGCGGT GCGTTGCTTC CTGCTGTCAG ATCTGGCGGC GCATATGATT
GCCGGCGGTC TGGTGTTCGG CTATTGCGCC GGCACCACCA CGCGATTTTC GATCCGGCCA
TGGATCGTGC AGGCCTCGCT GGTGGTCTCA GTGACTCCGG CGGTCGCGGC GGCGCTGTGG
AATTTCGACC TTCTGCACGT GGCTCAGGCG GTGTTGTTCC TGCTGTTCGC CTTGGGCGGC
CTCGAGCTGA TCGACTACAT CCACGCCACC ACCGCCGAGC AACTAACGCT ACGCGCCGAA
GCGACGCGGC TCGCCCGTGC CGATGCGCTG ACCAACCTGC CGAACCGGCG GCATCTGGTC
GAACATTTCA ACGAACTCGC CAAGCGCCTG GCCCGCCATG GCGAGAACTT CGCGGTGATC
AGCCTCGATC TCGATTTCTT CAAGGAGGCC AACGACCGCT TCGGCCACGC GGCCGGCGAT
GAGATCCTGC GCATCGTCGC CGAACGGATG ACCGAGCTAC TGGCCGACGA TGACCTCGCG
GCGCGGATCG GCGGCGACGA ATTCGTCGTC GTGCAGGCCA ACGTCTCGGA TGCGGCAGAA
GCGGACGACC TCGGCCGCCG CATCGTCGCG GCGCTGTCGG AGCCTTATGC GATCGCCGGC
GAAGCAGTAA TGATCGGCGC CAGCTTCGGC CGCGCGTTGG CGCCGGCCGA TGGCGCCACG
CTGGACGAAT TGCTGCACAA GGCCGATGAA GCCTTGTATG CGGTGAAACG CAACCGGCCC
GGCCGGGTTC GCGAGGTCGC CCCCGGCACT GATCATGCGC CGCTGGTGCC GGCGATCCCC
CCCCTGCCGG AGCACCACCA GACGGCACCG GCGATGCGAT CGACTAACGC CGACGCCGGC
TGA
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| Protein sequence | MTANSKIANA VYIEFVRLLY TARWPIVVVG CAMLTTGLAV AWQTRDVVMA VIGLTGMAVT
LGRLALCFAF DHAVAKRPLD VETAKRWERR LAVGVISTGV CVGAFAVRCF LLSDLAAHMI
AGGLVFGYCA GTTTRFSIRP WIVQASLVVS VTPAVAAALW NFDLLHVAQA VLFLLFALGG
LELIDYIHAT TAEQLTLRAE ATRLARADAL TNLPNRRHLV EHFNELAKRL ARHGENFAVI
SLDLDFFKEA NDRFGHAAGD EILRIVAERM TELLADDDLA ARIGGDEFVV VQANVSDAAE
ADDLGRRIVA ALSEPYAIAG EAVMIGASFG RALAPADGAT LDELLHKADE ALYAVKRNRP
GRVREVAPGT DHAPLVPAIP PLPEHHQTAP AMRSTNADAG
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