Gene Rpal_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5038 
Symbol 
ID6412732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5420512 
End bp5420964 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID642714923 
ProductMaoC domain protein dehydratase 
Protein accessionYP_001994002 
Protein GI192293397 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGA TGTACTTCGA GGAATTCGAG GTCGGCCAGG AATTCCGGCA TGCGCTGACG 
CGCACGGTCA CCGAGATGGA CAACACCATG TTCAGCCTGC TGACGCTGAA CCCGCAGCCG
CTGCACATCG ACGCGCATTT CGCCGAGAAG ACCGAGTTCG GCCAGCGTAT TTTCAACAGC
CTGTACACGC TCGGCATCAT GATCGGCATG ACCGTCTATG ATACGACCAT CGGCACCACC
GTCGCCAATC TCGGCATGAC CGACGTGACC TTCCCCAAGC CCGTTTTCCA TGGCGATACG
CTGCGCGCGA CCACCAAGGT GCTGTCGAAG CGGGAATCAA AGTCGCGTCC GAACGCCGGC
ATCGTCGAGT TCGAACACCA CGCGCTGAAC CAGAACGACG AGATCGTCGG CAAGTGCCGG
CGCACGGCGC TGATGCACAA GAGGCCGGCG TGA
 
Protein sequence
MAGMYFEEFE VGQEFRHALT RTVTEMDNTM FSLLTLNPQP LHIDAHFAEK TEFGQRIFNS 
LYTLGIMIGM TVYDTTIGTT VANLGMTDVT FPKPVFHGDT LRATTKVLSK RESKSRPNAG
IVEFEHHALN QNDEIVGKCR RTALMHKRPA