Gene Rpal_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5012 
Symbol 
ID6412704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp5396850 
End bp5397476 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID642714895 
ProductNUDIX hydrolase 
Protein accessionYP_001993976 
Protein GI192293371 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.615251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACG TGCACGACGA CGCCACCCGA GCCCTGATCG CCGCGCGCTG CGCGGCTTTT 
CCGCGCCACG ACGATGGCCT GACGCCGTCC GGGCTGAAGC GCGCCGCGGT CGCGATCGCG 
CTGGTCGCGG CGGAGGACGG CAGTGCGGCG TTCCTGCTGA CGCGTCGCTC GCCGCGGCTG 
CGCTCCCACG CCTATCAATG GGCGCTACCG GGCGGTCGCT GCGACGACGG CGAGACAGCG 
CCGGAAACCG CGCTGCGGGA ATTGCACGAA GAGCTCGGTC TCGCGCTTCA CGCCGGCGAC 
GTGCTCGGCA TCCTCGATGA CTATCCGACC CGCTCCGGCT ATCTGGTGAC CCCGGTGGTG 
GCGTGGGCCG CGGGAAGCGG GCCGCTGGCG CCGAACCCGG ATGAAGTCGC CTCGGTGCAT 
CAGGTCGGCC TTGCCGAGAT CGCGCCGCCG GATGTGTTCG ACTTCACCTC GATCCCGGAG 
AGCGACCGCC GCGTGGTCCG GTTTCGCTAT GAGGACGACT TCATCCACGC GCCGACCGCG 
GCCCTGATCT ATCAATTCCG CGAAGTGCTG GCCGGCCGCG TCACCCGCGT CGCCGATCTC 
GAGCAGCCGG TGTTCGCCTG GAAGTAG
 
Protein sequence
MSHVHDDATR ALIAARCAAF PRHDDGLTPS GLKRAAVAIA LVAAEDGSAA FLLTRRSPRL 
RSHAYQWALP GGRCDDGETA PETALRELHE ELGLALHAGD VLGILDDYPT RSGYLVTPVV 
AWAAGSGPLA PNPDEVASVH QVGLAEIAPP DVFDFTSIPE SDRRVVRFRY EDDFIHAPTA 
ALIYQFREVL AGRVTRVADL EQPVFAWK