| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4990 |
|---|
| Symbol | |
|---|
| ID | 6412682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 5371936 |
|---|
| End bp | 5372481 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642714873 |
|---|
| Product | adenine phosphoribosyltransferase |
|---|
| Protein accession | YP_001993954 |
|---|
| Protein GI | 192293349 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
|---|
| TIGRFAM ID | [TIGR01090] adenine phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG AGTTTGCAAA CGATTTGAAA GCCAGCGTCC GGGCGATTCC GGACTATCCC
AAGCCCGGCA TCATCTTCCG CGACATCACC ACGCTGCTCG GCGAACCGCG GGCGTTCCGC
CGCGCCATCG ACGAGCTGGT GCAGCCTTGG GCGGGTTCGA AGATCGACAA GGTGGCGGGC
ATTGAGGCGC GCGGCTTCAT CATCGGTGGC GCGATCGCCC ATCAGGTGTC GAGCGGCTTC
GTGCCGATCC GCAAGAAGGG CAAGCTGCCG CATACCTGCG TGTCGATGGA ATATGCGCTG
GAATACGGCA CCGACAAGAT CGAGGTCCAT GTCGATGCCA TCACCCCCGG CGAGCGGGTG
ATCCTGGTCG ACGACCTGAT CGCCACCGGC GGCACCGCCG AGGGCGCGAT CAAGCTGCTG
CGCCAGATCG GCGCCGAAGT CGTCGCCGCC TGCTTCGTGA TCGATCTGCC CGAGCTCGGC
GGCGCCGCCA AGATCCGGGC CATGGGCGTC CCGGTGCGGA CGCTGGTGGC GTTCGAAGGG
CATTGA
|
|---|
| Protein sequence | MTPEFANDLK ASVRAIPDYP KPGIIFRDIT TLLGEPRAFR RAIDELVQPW AGSKIDKVAG
IEARGFIIGG AIAHQVSSGF VPIRKKGKLP HTCVSMEYAL EYGTDKIEVH VDAITPGERV
ILVDDLIATG GTAEGAIKLL RQIGAEVVAA CFVIDLPELG GAAKIRAMGV PVRTLVAFEG
H
|
|---|
| |