| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4975 |
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| Symbol | |
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| ID | 6412667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5355113 |
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| End bp | 5355649 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642714858 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001993939 |
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| Protein GI | 192293334 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.161434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTCG AAATCCGCCC GACCGGCAAG GAAGTATTCT TTCCGGCGGG TGAGCTGATC
GTCTCCAAGA CCGACCTGAA GGGCCGCATC ACCTACGCCA ACAGCACGTT CTGCCACATC
GCGGGCTACA ACGAGGCGGA GCTGCTCGGC CAGCCGCACA GCATCATCCG GCATCCCGAC
ATGCCGCGCG CGGTGTTCCG TTTGGTGTGG GACACGATCG CGGCGGGCCG CGAGATCTTC
GGCTACGTCA AGAACATGGC GCGTAGCGGC GACCATTATT GGGTGTTCGC GCACATCACG
CCGTCATTCG ACGAGCACGG CAACATCGTC GCCTATCACT CTAACCGTCG CACGCCGGAT
CCGAGCGTGG TCGCCAATGC GATCGCGCCG CTCTACGCCG AGGTGCTGCG GGTCGAGCAG
GGTCACGCCA ACGGCAAGCA GGCAGTCGAG GCCGGCCTCA AGGCGCTGAC GGATTTCGTC
GCCTCCAAGA AAGTCAGCTA TGACGAACTT ATGTTCGCTC TCCAAAGCGC AGCTTAA
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| Protein sequence | MAVEIRPTGK EVFFPAGELI VSKTDLKGRI TYANSTFCHI AGYNEAELLG QPHSIIRHPD
MPRAVFRLVW DTIAAGREIF GYVKNMARSG DHYWVFAHIT PSFDEHGNIV AYHSNRRTPD
PSVVANAIAP LYAEVLRVEQ GHANGKQAVE AGLKALTDFV ASKKVSYDEL MFALQSAA
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