Gene Rpal_4970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4970 
Symbol 
ID6412662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5347873 
End bp5348928 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID642714853 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001993934 
Protein GI192293329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.317851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATGC CGGAATTGGT GATCGTGCTG GGCTTCGCGA TCGGCGCTGC GTTCGGCGTC 
GCCGGGCTGC TCAGCGGCTT CTGCCTGACG AGCGGACTGC GCGACTACTG GACCAAGGAC
GATGGCCGCA AGCTGCGCAG CTACGCAGTG GCGCTGGCGG TCGCGATCAT CGGCACCCAG
CTGATCGCCG GCCTTGGCTA TGTCGATATC GGCAAGTCGC TTTATCTGCA GCCGTCGTTC
TCCGCCCCGC TGATCTTCCT CGGCGGCCTG ATGTTCGGCC TCGGCATGGT GCTGGCGAAC
GGCTGCGCGT CGCGCGCACT GGTGTTGCTC GGCAAGGGCA ATCTGCGCTC GCTGCTGGTG
GTCGGGATCA TCGCGGTCGC GGCGCAGATG ACTCTGAAGG GCCTGATCGC GCCTGCTCGG
CTCGCGTTTC TGCAATGGAC CCAGGTGTCG CCGCCGCACG TCTCGGTGCC GTCGCTGATC
GGCGTGCTCG GCCTCGGTGA GGCCTTCGCC CAGATCGCCG CGGTGCTGAT CGCGGCCGGT
GCATTGCTGG TTTTCGCATT CTCCGATCGC TCGTTCCGTC GTGCCACCGG CCAGATCACC
GCCGGCGTGG TGATCGGCCT GCTGGTCGTC GCCGGCTGGC TCGCCACCGG TTACTTCGGT
ACCGACGAGT TCAACCCGAT CCCCGCGACT TCGCTGAGCT TCGTCGCGCC GCTGGCCGAT
ACGCTGCAAT ACGCGATGTT CTCCACCGGC CTGACGCTGA GCTTCGGCGT TGCGCTCGCG
GTCGGCGTGT TCGCCGGCAG TGCTGCGACA GCGTTGCTCA CCGGCCGGTT TGAGCTGGAG
GGCTTTACCT CGGCGCCGCA CATGCTGCGC TCAACGGTCG GCGCTGCGCT GATGGGCGCC
GGCGGTGCGA TGGCCTATGG CTGCTCGGTC GGGCAGGGCC TCACCGGCCT GTCGACGCTG
GCGCTGCCGT CGTTCATCGC CGTGGCCGGA ATCGTCGGTG GCGCTGCGCT CGGCATCCGC
CGCTTCGCTC CCGTCGCTGC GCTGGCGACG CGGTGA
 
Protein sequence
MQMPELVIVL GFAIGAAFGV AGLLSGFCLT SGLRDYWTKD DGRKLRSYAV ALAVAIIGTQ 
LIAGLGYVDI GKSLYLQPSF SAPLIFLGGL MFGLGMVLAN GCASRALVLL GKGNLRSLLV
VGIIAVAAQM TLKGLIAPAR LAFLQWTQVS PPHVSVPSLI GVLGLGEAFA QIAAVLIAAG
ALLVFAFSDR SFRRATGQIT AGVVIGLLVV AGWLATGYFG TDEFNPIPAT SLSFVAPLAD
TLQYAMFSTG LTLSFGVALA VGVFAGSAAT ALLTGRFELE GFTSAPHMLR STVGAALMGA
GGAMAYGCSV GQGLTGLSTL ALPSFIAVAG IVGGAALGIR RFAPVAALAT R