Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4970 |
Symbol | |
ID | 6412662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5347873 |
End bp | 5348928 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642714853 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_001993934 |
Protein GI | 192293329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.317851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATGC CGGAATTGGT GATCGTGCTG GGCTTCGCGA TCGGCGCTGC GTTCGGCGTC GCCGGGCTGC TCAGCGGCTT CTGCCTGACG AGCGGACTGC GCGACTACTG GACCAAGGAC GATGGCCGCA AGCTGCGCAG CTACGCAGTG GCGCTGGCGG TCGCGATCAT CGGCACCCAG CTGATCGCCG GCCTTGGCTA TGTCGATATC GGCAAGTCGC TTTATCTGCA GCCGTCGTTC TCCGCCCCGC TGATCTTCCT CGGCGGCCTG ATGTTCGGCC TCGGCATGGT GCTGGCGAAC GGCTGCGCGT CGCGCGCACT GGTGTTGCTC GGCAAGGGCA ATCTGCGCTC GCTGCTGGTG GTCGGGATCA TCGCGGTCGC GGCGCAGATG ACTCTGAAGG GCCTGATCGC GCCTGCTCGG CTCGCGTTTC TGCAATGGAC CCAGGTGTCG CCGCCGCACG TCTCGGTGCC GTCGCTGATC GGCGTGCTCG GCCTCGGTGA GGCCTTCGCC CAGATCGCCG CGGTGCTGAT CGCGGCCGGT GCATTGCTGG TTTTCGCATT CTCCGATCGC TCGTTCCGTC GTGCCACCGG CCAGATCACC GCCGGCGTGG TGATCGGCCT GCTGGTCGTC GCCGGCTGGC TCGCCACCGG TTACTTCGGT ACCGACGAGT TCAACCCGAT CCCCGCGACT TCGCTGAGCT TCGTCGCGCC GCTGGCCGAT ACGCTGCAAT ACGCGATGTT CTCCACCGGC CTGACGCTGA GCTTCGGCGT TGCGCTCGCG GTCGGCGTGT TCGCCGGCAG TGCTGCGACA GCGTTGCTCA CCGGCCGGTT TGAGCTGGAG GGCTTTACCT CGGCGCCGCA CATGCTGCGC TCAACGGTCG GCGCTGCGCT GATGGGCGCC GGCGGTGCGA TGGCCTATGG CTGCTCGGTC GGGCAGGGCC TCACCGGCCT GTCGACGCTG GCGCTGCCGT CGTTCATCGC CGTGGCCGGA ATCGTCGGTG GCGCTGCGCT CGGCATCCGC CGCTTCGCTC CCGTCGCTGC GCTGGCGACG CGGTGA
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Protein sequence | MQMPELVIVL GFAIGAAFGV AGLLSGFCLT SGLRDYWTKD DGRKLRSYAV ALAVAIIGTQ LIAGLGYVDI GKSLYLQPSF SAPLIFLGGL MFGLGMVLAN GCASRALVLL GKGNLRSLLV VGIIAVAAQM TLKGLIAPAR LAFLQWTQVS PPHVSVPSLI GVLGLGEAFA QIAAVLIAAG ALLVFAFSDR SFRRATGQIT AGVVIGLLVV AGWLATGYFG TDEFNPIPAT SLSFVAPLAD TLQYAMFSTG LTLSFGVALA VGVFAGSAAT ALLTGRFELE GFTSAPHMLR STVGAALMGA GGAMAYGCSV GQGLTGLSTL ALPSFIAVAG IVGGAALGIR RFAPVAALAT R
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