Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4969 |
Symbol | |
ID | 6412661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5347189 |
End bp | 5347641 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642714852 |
Product | hypothetical protein |
Protein accession | YP_001993933 |
Protein GI | 192293328 |
COG category | [S] Function unknown |
COG ID | [COG1416] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.808263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCGT TGTTCAAGGC TGCCGCTGCG GTGGCGCTGC TGATTGCTGC TGCGGTCCCT GGTTTTGCGG CCGATGCCAA GCCGCACCGG GTCGCCATCC AAGTCGATCA GAACGACCCC GCGGTGATGA ACCTTGCGCT CAACAACGCC GCCAACATCA TCGAGTACTA CAAGGCCAAG AACGAGGACG TTCAGGTCGA AGTCGTCACC TTCGGCCCGG GTCTGCACAT GCTGCGCACC GACTCATCGC CGGTGAAGGA TCGCATCAAG CAGATCGCCG ACGGCGCGTT TCCCTCCAGC ATCAAATTCG CGGCCTGCGA GAACACCAAG ACCGGCATGG AGAAGCATGA GGGCCACGCC GTCAGCCTCA TTCCGCAAGC GAGTGCGGTG CCGTCGGGTG CGGTGCGTCT GATGGAGCTG CAGGACGACG GCTGGGCTTA TTTGCGGCCG TAA
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Protein sequence | MKSLFKAAAA VALLIAAAVP GFAADAKPHR VAIQVDQNDP AVMNLALNNA ANIIEYYKAK NEDVQVEVVT FGPGLHMLRT DSSPVKDRIK QIADGAFPSS IKFAACENTK TGMEKHEGHA VSLIPQASAV PSGAVRLMEL QDDGWAYLRP
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