Gene Rpal_4969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4969 
Symbol 
ID6412661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5347189 
End bp5347641 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID642714852 
Producthypothetical protein 
Protein accessionYP_001993933 
Protein GI192293328 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.808263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGT TGTTCAAGGC TGCCGCTGCG GTGGCGCTGC TGATTGCTGC TGCGGTCCCT 
GGTTTTGCGG CCGATGCCAA GCCGCACCGG GTCGCCATCC AAGTCGATCA GAACGACCCC
GCGGTGATGA ACCTTGCGCT CAACAACGCC GCCAACATCA TCGAGTACTA CAAGGCCAAG
AACGAGGACG TTCAGGTCGA AGTCGTCACC TTCGGCCCGG GTCTGCACAT GCTGCGCACC
GACTCATCGC CGGTGAAGGA TCGCATCAAG CAGATCGCCG ACGGCGCGTT TCCCTCCAGC
ATCAAATTCG CGGCCTGCGA GAACACCAAG ACCGGCATGG AGAAGCATGA GGGCCACGCC
GTCAGCCTCA TTCCGCAAGC GAGTGCGGTG CCGTCGGGTG CGGTGCGTCT GATGGAGCTG
CAGGACGACG GCTGGGCTTA TTTGCGGCCG TAA
 
Protein sequence
MKSLFKAAAA VALLIAAAVP GFAADAKPHR VAIQVDQNDP AVMNLALNNA ANIIEYYKAK 
NEDVQVEVVT FGPGLHMLRT DSSPVKDRIK QIADGAFPSS IKFAACENTK TGMEKHEGHA
VSLIPQASAV PSGAVRLMEL QDDGWAYLRP