Gene Rpal_4965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4965 
Symbol 
ID6412657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5344394 
End bp5345137 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID642714848 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_001993929 
Protein GI192293324 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.508234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTTCGA ATATCTCGCT GGTCGGCGCC TTCGGGGCCG GGGTGCTGTC GTTCCTGTCG 
CCCTGCGTGC TGCCGTTGGT TCCGCCATAT CTGTGCTTCC TGGCCGGTGT CAGCCTCGAT
CAGCTGACGC GCGGCGCTGA TCAGCCGTCC AAGACCGTCG ACGGGCGCGT GGTTGCCGCC
TCGCTGGCGT TCGTGCTCGG CTTTTCCACC GTGTTCGTCG CGCTCGGTGC GTCCGCCTCG
GCGATCGGCA AGGCGGTGAC CGATCATTTC GAGGCGCTCG GCATCGTGGC CGGGGTCATC
ATCATCGTGC TCGGGCTGCA TTTCCTCGGG TTGTTCCGGA TCGGCCTTCT GTATCGCGAG
GCCCGTTTTC ACAACGTCAG CCGCGGCGTC GGCTTGCTTG GTGCCTACGT CGTCGGCCTC
GCCTTCGCGT TCGGCTGGAC GCCGTGCGTG GGACCGGTGC TGGCGACGAT CCTGCTGGTC
GCTGGCGTCG AGGGCTCGGC GGCGCACGGG GCGGTGCTGC TCGGCGCGTA TTCGCTCGGG
ATCGGCCTGC CGTTCCTGCT GGCGTCGCTG TTCTCCGGCG CGTTCATCCG GCTGATGGCG
CGACTGCGGG CGCAGATGGC GACGGTCGAG AAAGTCATGG GCGGCGCATT GGTGCTGACC
GGCGTGCTGT TTCTCACCGG CGCGATGCCG AAGATTTCCG GATGGCTGCT GCAGACCTTT
CCCGCCTTCG GCGAGATCGG CTGA
 
Protein sequence
MVSNISLVGA FGAGVLSFLS PCVLPLVPPY LCFLAGVSLD QLTRGADQPS KTVDGRVVAA 
SLAFVLGFST VFVALGASAS AIGKAVTDHF EALGIVAGVI IIVLGLHFLG LFRIGLLYRE
ARFHNVSRGV GLLGAYVVGL AFAFGWTPCV GPVLATILLV AGVEGSAAHG AVLLGAYSLG
IGLPFLLASL FSGAFIRLMA RLRAQMATVE KVMGGALVLT GVLFLTGAMP KISGWLLQTF
PAFGEIG