Gene Rpal_4922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4922 
Symbol 
ID6412613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5303292 
End bp5304080 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID642714804 
ProductMOSC domain containing protein 
Protein accessionYP_001993886 
Protein GI192293281 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.440017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACC TTGCGCTCGC CTCCGTCACC TCGATCTACC GCTATCCGGT CAAGGGCTTG 
TCGCCCGAGC CATTACCCAC CGTGGCTCTG AACGCCGGCC AGACCTTGCC CGGCGACCGG
GCGTTCGCCA TCGAAAACGG GCCGATCGGA TTCGACCCGG CCAATCCCCG CTACTTCCCC
AAGATCAGGT TTCTGATGCT GATGCGCAAC GAGCGGCTCG CCGCCCTGCG CAGCCGTTAT
GACGCCGCGA CCGGCGAGCT CTACATCTGT CGCGACGGGG CCGAAGTGAT CCGCGGCGAT
CTCGGCAGCG ACGCCGGGCG GGCTGCGATC GAAGAGTTCT TCGCCGGCTA TTGCGCCGAC
GAACTGCGCG GGCCGCCGAA ATTGCTGGCC GGCCAAGGCC ACAGCTTTTC GGACGTCGCC
CGCAAGGTGG TGTCGATCAT CAACCTGGCA AGCGTCGCGG CGCTGGAAGC CATGATCGGC
CGCCCAGTCG ATCCGCTGCG CTTCCGCGCC AACCTCTATG TCCAGGGCTG GCCGGCCTGG
CACGAATTCG ACCTGATGGA CCAGACGCTG CAGATCGGCA GCGCCAAGCT CAAGGTGGTC
AAACGCATCG TCCGCTGCGC CGCCACCAAT GTCGATCCAC AGACCGCCGC ACGCGACATG
GCGATCCCCG AGACGTTGCA GCAGAACCTC GGCCACGCCG ATTGCGGGGT GTATGCCGAA
GTGATCGAAG CCGGCGACAT CGCGCAAGGT GATGCGGTGC AGGTCGAGCA GGCGGCGCTT
TTCGCGTAA
 
Protein sequence
MTDLALASVT SIYRYPVKGL SPEPLPTVAL NAGQTLPGDR AFAIENGPIG FDPANPRYFP 
KIRFLMLMRN ERLAALRSRY DAATGELYIC RDGAEVIRGD LGSDAGRAAI EEFFAGYCAD
ELRGPPKLLA GQGHSFSDVA RKVVSIINLA SVAALEAMIG RPVDPLRFRA NLYVQGWPAW
HEFDLMDQTL QIGSAKLKVV KRIVRCAATN VDPQTAARDM AIPETLQQNL GHADCGVYAE
VIEAGDIAQG DAVQVEQAAL FA