| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4889 |
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| Symbol | |
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| ID | 6412575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5256234 |
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| End bp | 5258024 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714766 |
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| Product | putative periplasmic binding ABC transporter protein, putative sugar binding precursor |
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| Protein accession | YP_001993853 |
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| Protein GI | 192293248 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGAC GAAAGCCCCA CCTCAGCCGT TTGCGGCTGA TGACGATGGC GAGCGCCGCG
GCGCTTGTCG CCGGGTCGAT GATGCTGGCG GCGCCGGCAT GGTCGGCCGA CGATGCTGTG
CTGAAGAAGT GGATCGACGA GGAATTCCAA CCCTCGACGC TGTCCAAGGA AGAACAGCTC
AAGGAATTGC AGTGGTTCGC CAAGGCGGCC GAGCCGTTCA AGGGCATGGA CATCAACGTC
GTCTCCGAGA CGATCACCAC GCACGAATAC GAAGCCAAGA CGCTCGCCAA GGCGTTCTCG
GAAATCACCG GCATCAAGCT GAAGCACGAT TTGATCCAGG AGGGCGACGT CGTCGAGAAG
CTGCAGACCC AGATGCAGTC CGGCAAGAAC GTCTATGACG GCTGGATCAA CGATAGCGAC
CTGATCGGTA CCCATTTCCG TTACGGCCAG ACCATCGCGC TGTCGGACTA CATGACCGGC
GAGGGCAAGG ACGTCACCGA TCCGATGCTC GACATCAACG ACTTCATCGG CAAGTCGTTC
ACCACCGCGC CCGACAAGAA GATGTATCAG CTGCCGGACC AGCAGTTCGC CAATCTGTAC
TGGTTCCGCT ACGACTGGTT CACCAATCCG GACTACAAGG CCAAGTTCAA GGCGAAGTAC
GGCTACGACC TCGGCGTCCC GGTGAACTGG TCGGCCTATG AGGACATCGC CGAGTTCTTC
ACCAACGACA TCAAGGAAAT CAACGGCGTC AAAGTCTATG GCCACATGGA CTACGGCAAG
AAGGATCCGT CGCTCGGCTG GCGCTTCACC GACGCCTGGC TGTCGATGGC CGGCAACGGC
GACAAGGGCC TGCCGAACGG TCTGCCGGTC GACGAATGGG GCATCCGCAT GGAAGGCTGC
CGTCCGGTCG GCTCGTCGAT CGAGCGCGGC GGCGACACCA ACGGTCCGGC CGCGGTGTAC
TCGATCGTCA AATATCTCGA CTGGATGAAG AAGTACGCCC CGCCGCAGGC CCAGGGCATG
ACGTTCTCGG AGTCGGGGCC GGTGCCGGCG CAGGGCAACG TCGCCCAGCA GATGTTCTGG
TACACCGCCT TCACCGCCGA CATGGTGAAG CCGGGCCTGC CGGTGATGAA CGCCGACGGC
ACGCCGAAGT GGCGGATGGC GCCGTCGCCG CACGGCGCGT ACTGGAAAGA AGGCATGAAG
CTCGGCTACC AGGACGTCGG CTCGGGCACG CTGCTGAAGT CGACCCCGCC GGATCGCCGC
AAGGCCGCCT GGCTGTATCT GCAGTTCATC ACCTCCAAGA CGGTGTCGCT GAAGAAGAGC
CATGTCGGTC TCACCTTCAT CCGTGAGAGC GATATCTGGG ACAAGTCGTT CACCGAACGT
GCGCCGAAGC TCGGCGGCCT GATCGAGTTC TATCGCTCGC CGGCCCGCGT GCAGTGGTCG
CCCACCGGCA ACAACATCCC GGACTATCCG AAGCTGGCGC AGCTGTGGTG GCAGAACATC
GGCGACGCGT CGTCCGGTGC GAAGACTCCG CAGGCCGCGA TGGACTCGCT GGCCGCGGCG
CAGGACTCGG TGCTGGAGCG CCTCGAAAAG TCGAAGGTGC AGGGCGATTG CGGTCCGAAG
CTGAACAAGA AGGAGACCGC CGAGTACTGG TACGCCAAGG CCGAGAAGGA CGGCAACATC
GCGCCGCAGC GCAAGCTGGC GAACGAGAAG CCGAAGGGTG AAACCGTCGA CTACGACACC
CTGATCAAGT CCTGGCCGGC GACCCCGCCG AAGCGCGCCG AAGCGAAGTA A
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| Protein sequence | MIGRKPHLSR LRLMTMASAA ALVAGSMMLA APAWSADDAV LKKWIDEEFQ PSTLSKEEQL
KELQWFAKAA EPFKGMDINV VSETITTHEY EAKTLAKAFS EITGIKLKHD LIQEGDVVEK
LQTQMQSGKN VYDGWINDSD LIGTHFRYGQ TIALSDYMTG EGKDVTDPML DINDFIGKSF
TTAPDKKMYQ LPDQQFANLY WFRYDWFTNP DYKAKFKAKY GYDLGVPVNW SAYEDIAEFF
TNDIKEINGV KVYGHMDYGK KDPSLGWRFT DAWLSMAGNG DKGLPNGLPV DEWGIRMEGC
RPVGSSIERG GDTNGPAAVY SIVKYLDWMK KYAPPQAQGM TFSESGPVPA QGNVAQQMFW
YTAFTADMVK PGLPVMNADG TPKWRMAPSP HGAYWKEGMK LGYQDVGSGT LLKSTPPDRR
KAAWLYLQFI TSKTVSLKKS HVGLTFIRES DIWDKSFTER APKLGGLIEF YRSPARVQWS
PTGNNIPDYP KLAQLWWQNI GDASSGAKTP QAAMDSLAAA QDSVLERLEK SKVQGDCGPK
LNKKETAEYW YAKAEKDGNI APQRKLANEK PKGETVDYDT LIKSWPATPP KRAEAK
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