| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4787 |
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| Symbol | |
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| ID | 6412473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5151247 |
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| End bp | 5152932 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714665 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001993752 |
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| Protein GI | 192293147 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.708956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTCA CGAATCTGCG GATCTCGCCG AAGCTGGGCA TCCTGGTCGG CGTGGCGATG
CTCGGCCTGG TGGCGTCCGG CCTGTTTGCC GCGTCGATGC TACAGCGGGA GATGAGCAAC
GAGCGGTTCG AGCAGACCAA GGCACTGGTC GAAAGCGCGC TGAACATGGC GATCGGTCTG
CAGAAGCAGG TCGCGGCCGG CAAGCTCACC AAGGAGCAGG CGATCGCCGA GTTCCAGCAG
CGCGCCCAAA GCATGACCTA CGACGGGACC AACGGTTACT TCTTCGCCTA CAAAATGGAC
GGATCGGTCG TCGTGATGTC GGATCCGAAA ATGATCGGCA CCAACCGGCT CGACGTCGAG
ACCGGCGGCC GCAAGATCGT GCGCGAACTA CGCGACGGCG TTGCCGCCAA GGGCGACGTG
ACGCTGATCT ACGAATTCAT GAAGCCCGGC AGCAGCGAGT TGTTGCGCAA GGTGTCGTAT
GCCGCCGCGG TTCCCGGCTG GGACATGTTC GTCGGCACCG GCGTTTACTT GCAGGACATC
AACGCCAAGC TGAAGCCGCT TCTGACCTGG CTCGGCGTCG TCATCGTCGG CATCGGCGTG
GTGTGTGCCC TGGTGGCGTG GCTGATCAGC CGCAGCATCA CCCAGCCACT CGGCGCGCTC
GGCACCCGTA TGACCTCGCT GGCCGAAGGG CAGCTCGACG CGGCGATCCC CGGTGTCGAC
CGCGGCGACG AAATCGGCGC GATGGCGCAG ACCGTGCAGG TGTTCAAGGA CAACGCGATC
CGTATCCGCG GGCTCGAACA GCAGGAGCAG GAGGCGCAGC GCCGCGCCGC GGCCGAGCGC
AGCGCGCTGA TGCAGAGCAT CGCCGATGAT TTCGAACGCA GCGTCAATGG CGTGGTGCGG
AGCGTGGCCG ACGCCACGCG GTACATGCAG AGCACCGCGC AGTCGATGAC CTCGACCGCG
GCCGATGCAT CGACGCGTGC GGCGGCGGTT GGCGCGGCCT CGGATTCGGC ATCCGGTATG
GTCGGGACCG TGGCGTCGGC CTCCGAGCAG CTCTCGAGTT CAGTGCAGGA AATTTCCCGT
CAGGTCGACC AGTCGCGCTC GGTTGCGAGT AAGGCGGTGA GCGATGCGGA GCAGACCAAC
GGGACGGTGA TGCAGCTCTC GGTCAGCGCC GAGAAGATCG GCGAAGTCGT GCAACTGATT
CACTCGATCG CTTCGCAAAC CAATCTGCTG GCGCTCAACG CCACGATCGA AGCGGCGCGC
GCCGGCGAGT CCGGACGCGG CTTTGCGGTG GTGGCGAGCG AAGTGAAGGC GCTGGCGAGC
CAGACCGCGA AAGCGACCGA AGAAATCTCC GCGCAGGTCG CTGCGATGCA GTCCTCGACC
GCGAGTGCGG TGGAGTCGAT CGGCGGCATC ACCGCGACGA TCGGCGAGAT CAACAAGATC
ACCGTGGCGA TTGCGACGGC GGTCGAGCAG CAGGGTGCTG CGACGCAGGA AATCGCACGC
AACATTCAAT CGGTCGCGGC CGGTTCCAGC GAGATCAGCG ATCATATCGG CGGCGTCAGT
TCCGCCGCCC AGGCGACCGG CGACGCAGCT TCGGAAGTCC TGTCGCATGC CCGTGCGCTC
GACAGCCAGT CGGGTGCACT GCAATCGGCG GTCGACGATT TCCTGCGCAA GATCCGCGCC
GCGTGA
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| Protein sequence | MKFTNLRISP KLGILVGVAM LGLVASGLFA ASMLQREMSN ERFEQTKALV ESALNMAIGL
QKQVAAGKLT KEQAIAEFQQ RAQSMTYDGT NGYFFAYKMD GSVVVMSDPK MIGTNRLDVE
TGGRKIVREL RDGVAAKGDV TLIYEFMKPG SSELLRKVSY AAAVPGWDMF VGTGVYLQDI
NAKLKPLLTW LGVVIVGIGV VCALVAWLIS RSITQPLGAL GTRMTSLAEG QLDAAIPGVD
RGDEIGAMAQ TVQVFKDNAI RIRGLEQQEQ EAQRRAAAER SALMQSIADD FERSVNGVVR
SVADATRYMQ STAQSMTSTA ADASTRAAAV GAASDSASGM VGTVASASEQ LSSSVQEISR
QVDQSRSVAS KAVSDAEQTN GTVMQLSVSA EKIGEVVQLI HSIASQTNLL ALNATIEAAR
AGESGRGFAV VASEVKALAS QTAKATEEIS AQVAAMQSST ASAVESIGGI TATIGEINKI
TVAIATAVEQ QGAATQEIAR NIQSVAAGSS EISDHIGGVS SAAQATGDAA SEVLSHARAL
DSQSGALQSA VDDFLRKIRA A
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