Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4780 |
Symbol | |
ID | 6412466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5144163 |
End bp | 5145068 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642714659 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_001993746 |
Protein GI | 192293141 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.8061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGCCT GGTCCCGCTC CGCTTTCGGC TGGCTCGCTC ACCAGCCCTA TCTGCTGCTC AGCCTGACCT CGCTGTTCTG GGCCGGCAAC ATCGTGCTCG GCCGCGCGGT CGCCGGCCAT GTGCCGCCGG TGACGCTGAG CTGCGCGCGC TGGGTCGGCG CGATGCTGTT GCTGCTGCCG TTTGCCTGGC CGCATCTGCG GCACGATTGG CGCAAGCTGC GCGCGCAGTG GAAACTGATG ATCGTGCTAT CCGCGACCGG CTTCGCGATC AACAACGCGC TGTCGTATTG GGGGCTGCAA TACACCCAGG CGCTCAACGC GCTGTTGATG CAGTCTTCCG GGCCGCTGTT CGTGGCGCTG TGGTCGCTCT TGCTGTTCGG CGTGCGGCTG ACCTGGATGC AGGCGGCCGG CATCGCGCTG TCGCTGCTCG GCGTGCTGAC CATCATCCTG CGCGGCGACT TCGCGGCGCT GGCAGGGATC GAACTCAACC GCGGCGACCT GATGGTGGCC GGCGCGCTGT GCGCATTCGG GCTGTATTCG GCCCTGATGC CGAAGCGGCC CGCAACCCAT CCGCTGTCGC TGATCGTGGT GACGACCGGC TGCGGCGCGC TGCTGTTGCT GCCGTTCAGC GCCTGGGAAT ATGCCAGCGG CGTGCGGCCG AGCGCCGACT GGCTCAGCGT CGCGACGCTC GCCTATGTGG TGATCTTCCC CTCGATGCTG GCGTATCTGT GCTTCAACCG CGGCGTGGCG CTGATCGGAC CGAACCGCTC GGCGCCGTTC CTGCATCTGA TGCCGGTGTT CGGCTCGGTG ATGGCGATCG TGCTGCTCGG CGAAAAGCCG GAGCTGTTCC ACCTCGCCGG CTACGCCATG GTGGTGGCCG GCGTGTTCAT CGCGGCGCGG CGCTGA
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Protein sequence | MIAWSRSAFG WLAHQPYLLL SLTSLFWAGN IVLGRAVAGH VPPVTLSCAR WVGAMLLLLP FAWPHLRHDW RKLRAQWKLM IVLSATGFAI NNALSYWGLQ YTQALNALLM QSSGPLFVAL WSLLLFGVRL TWMQAAGIAL SLLGVLTIIL RGDFAALAGI ELNRGDLMVA GALCAFGLYS ALMPKRPATH PLSLIVVTTG CGALLLLPFS AWEYASGVRP SADWLSVATL AYVVIFPSML AYLCFNRGVA LIGPNRSAPF LHLMPVFGSV MAIVLLGEKP ELFHLAGYAM VVAGVFIAAR R
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