Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4744 |
Symbol | |
ID | 6412430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 5107621 |
End bp | 5109420 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642714623 |
Product | cyclic beta-1,2-glucan ABC transporter |
Protein accession | YP_001993710 |
Protein GI | 192293105 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTGT TTCATCTCTA CACCCGCGTG CTGCAACTGC TCGGCAAGGA GGCGCGGCTC GGCTGGATTC TCGCCGTCGC CAATCTGCTG CTCGCCACCG CGCAATTCGC CGAGCCGATC CTGTTCGGCC GCATCGTTGA CGTGATGAGC GGCAATCTCG CCACCGGCGC GCTGGTGCCG GAGACGCGTT CGCCCTGGCC GCTGCTCGGC GCCTGGGTCG GCTTCGGCCT GTTCACCATC ATGTGCTCGG CGCTGGTCGC GCTGCAAGCC GACCGGCTGG CCCATCGGCG GCGCCAGGCG GTGCTGACCA GCTATTTCGA ACACATCCTG CAACTGCCGA TCAGCTTTCA CACCGGCACC CACTCGGGCC GGCTGATGAA AGTAATGCTG CAAGGCACCG ACGCGCTGTG GCGGATGTGG CTCGGCTTCT TCCGGGAGCA CTTCGCCGCC ATTCTGTCGC TGGTCGTGCT GCTGCCGCTG TCGCTCTACA TCAATTGGCG GCTGGCGATC CTGTTGTTCG TGCTGTGCAT CGTGTTCACG GTGCTGACCA CGCTGGTGGT GCACAAGACC TACGGCATGC AGGGTGAGGT CGAGGCACAA TACAGCGACC TGTCGGCGCG CGCCTCCGAC GCGCTCGGCA ATGTCGCGCT GGTGCAGAGC TTCGTTCGCG TCGACGCCGA GGTGCAGGGG CTGCGCAACA TCTCCGGCCG GCTGCTCGAG GCGCAGATGC CGGTGCTGTC GTGGTGGGCG CTGGTGACGG TGATCACCCG CGCCTCCACC ACCATCACGG TGCTGTCGAT CTTCGCGCTC GGCATCTATC TCAATCAGCA GGGCCTCACC AGCGTCGGTG AGATCGTGAT GTTCGTCTCG TTCGCGACGC TGCTGATCCA GCGGCTCGAA CAGGTGGTAA ACTTCATCAA CAACGTGCTG ATGGAAGCGC CCCGCTTGCG CGAGTTTATC GCGGTGCTCG ATACCGTGCC GGCGGTGCGC GACCGAGCGG ACACGATCGA TTGCGGCCGG CTGTCCGGCC TGGTCGAATT CCAGAATGTG TCGTTCTCCT ATGACGGCAA ACGGCCGGCC ATCGAAGATC TGAGCTTCAC CGCCCTGCCC GGCGATACCA TCGCGCTGGT CGGCGCCACT GGCGCCGGCA AGTCCACCGC GATCGCGCTG TTGCACCGTG CCTTCGATCC GCAGTCCGGC GTGATCAAGG TCGACGGCAT GGACATCCGC GGTATCACGC TGGCCTCGCT GCGGCGGAAC ATCGGCGTCG TGTTTCAGGA AGCGCTGCTG TTTGACCGCT CGATCGCCGA CAATCTGCGG GTCGGCAAGC CGGACGCCAC GCCGGAAGAA CTGCGCCTCG CTGCAGAACG CGCGCAGGCG CTGGAGTTCA TCGAGCGCAG CGACCACAAA TTCGACACCA ACGCCGGCGA GCGCGGCCGC ATGCTGTCCG GCGGCGAACG GCAGCGACTG TCGATCGCCC GCGCGCTGCT GAAGGATCCT CCGATCTTGA TCCTCGACGA GGCGACCTCG GCGTTGGACG CGGTGACCGA AGCCAAACTC AACCTCGCGC TCGACGAGGT GATGAAAGGC CGCACCACCT TCGTGATCGC GCACCGGCTG TCCACCATCC GTGATGCCAC CCGTATTCTG GTGTTCGACA ACGGCAAAGT GATCGAAAGC GGAACGTTCG ATGAACTGGT GGCGCGCGGC GGTGCATTCG CGCAATTGGC ACGGGCGCAG TTCATGGTGC AGGAGAGCGC GCGCTCGGCG ATGAGCTCGG CAGCCGACGC ACAACTCTGA
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Protein sequence | MSLFHLYTRV LQLLGKEARL GWILAVANLL LATAQFAEPI LFGRIVDVMS GNLATGALVP ETRSPWPLLG AWVGFGLFTI MCSALVALQA DRLAHRRRQA VLTSYFEHIL QLPISFHTGT HSGRLMKVML QGTDALWRMW LGFFREHFAA ILSLVVLLPL SLYINWRLAI LLFVLCIVFT VLTTLVVHKT YGMQGEVEAQ YSDLSARASD ALGNVALVQS FVRVDAEVQG LRNISGRLLE AQMPVLSWWA LVTVITRAST TITVLSIFAL GIYLNQQGLT SVGEIVMFVS FATLLIQRLE QVVNFINNVL MEAPRLREFI AVLDTVPAVR DRADTIDCGR LSGLVEFQNV SFSYDGKRPA IEDLSFTALP GDTIALVGAT GAGKSTAIAL LHRAFDPQSG VIKVDGMDIR GITLASLRRN IGVVFQEALL FDRSIADNLR VGKPDATPEE LRLAAERAQA LEFIERSDHK FDTNAGERGR MLSGGERQRL SIARALLKDP PILILDEATS ALDAVTEAKL NLALDEVMKG RTTFVIAHRL STIRDATRIL VFDNGKVIES GTFDELVARG GAFAQLARAQ FMVQESARSA MSSAADAQL
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