| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4717 |
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| Symbol | |
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| ID | 6412403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5075892 |
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| End bp | 5077040 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714596 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_001993683 |
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| Protein GI | 192293078 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.819225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACCAG CCGTGAGTCT GGCGCCTGTG CTGAATGCCA AGGCCGATGG CGATACGCTG
GAACTCAAGC CCAAGGGGGC TTGGACGGCG ACGAACAGCA AGTTCATGGA GCAGCTGTCG
CAGGACGTTG CGCCGCAGAT TGCGGCGGCA AAGTCGCTGA CCATTGATAT GGCCGAGATC
GGCGAGATCG ACACGATCGG CGCCTGGGTA CTGGAAAAGC TGTCGCGTAG TGCCGCACAG
GCTGGTCGCA CCGCACAGTT CAAAGGAATT TCCACGAGCT ACGCGGAGCT GATCGACGAA
GTCAGACAGC TCAATCGACG TGGGCCGACC CCACACCCCA AGCCCAACCC GATCATCGCG
AAGCTCGACG AAATCGGGCG GTCGGCCTGG AGCGCCACCA CCGACATGGC GGTGTTTCTG
GAAATGCTCG GTGCCCTTGG CGCCGCGCTG CTCGGTGTGC TGCGCCGGCC GCGCTCGCTG
CGCCTGACCT CGTTGACTTA CCAGGTGTAC AGGGTCGGCT GGCAGGCGAT CCCGATCATG
GTGCTGATCA CCTTTCTGAT CGGAGCGATC ATCGCCCAGC AGGGGATCTT CCACTTCCGC
AAGTTCGGCG CTGAATCTTA TGTGGTCGAC ATGGTCGGCA TCCTGGTGCT GCGCGAAATC
GGCGTGCTGA TCGTCGCCAT CATGGTCGCG GGCCGGTCCG GCAGTGCCTA TACGGCCGAA
CTCGGCTCGA TGAAGATGCG CGAAGAAATC GACGCGCTCT CGACAATGGG GCTCGATCCG
GTCGAGGTGC TGATCCTGCC GCGGATCATC GCACTGGTGA TCGCGCTGCC GATCCTGGCC
TTCGTCGGGT CGATGGCGGC GCTGTATGGC GGCCTGCTGA CGGCGTGGTT CTATGGCGGG
ATGCAGCCGT CGGTTTTCAT CGCCCGGCTG CACGAGGCGG TGTCGCTGAA CTCCTTCGAG
GTCGGGATGT GGAAGGCGCC GTTCATGGCG CTGGTGATCG GCATCGTCGC CTGCAGCGAG
GGCCTGCGGG TCAAGGGCAG CGCCGAATCG CTCGGCCTGC AGACCACCAC GTCGGTGGTG
AAGTCGATCT TTCTGGTGAT CGTGCTGGAC GGATTGTTCG CCGTGTTCTT CGCGTCGATC
GGGATGTAG
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| Protein sequence | MGPAVSLAPV LNAKADGDTL ELKPKGAWTA TNSKFMEQLS QDVAPQIAAA KSLTIDMAEI
GEIDTIGAWV LEKLSRSAAQ AGRTAQFKGI STSYAELIDE VRQLNRRGPT PHPKPNPIIA
KLDEIGRSAW SATTDMAVFL EMLGALGAAL LGVLRRPRSL RLTSLTYQVY RVGWQAIPIM
VLITFLIGAI IAQQGIFHFR KFGAESYVVD MVGILVLREI GVLIVAIMVA GRSGSAYTAE
LGSMKMREEI DALSTMGLDP VEVLILPRII ALVIALPILA FVGSMAALYG GLLTAWFYGG
MQPSVFIARL HEAVSLNSFE VGMWKAPFMA LVIGIVACSE GLRVKGSAES LGLQTTTSVV
KSIFLVIVLD GLFAVFFASI GM
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