| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4715 |
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| Symbol | |
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| ID | 6412401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5073902 |
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| End bp | 5075098 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714594 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001993681 |
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| Protein GI | 192293076 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.324726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACTC GTGCTCCTTT CGTGATCGTT GGTGCGTTCG TACTCGCGGC GATCTTTGCG
GTGTTCGGCT TCGTGTTCTG GCTGCACAAC ACCTCGGGCG TCGGTGCGCG CACCAGCTAC
CACGTCCAGT TCCGCGATCC AGTGCCGGGA CTGCTGGTCG GTGCCGCCGT GCTGTTCAAC
GGCATCCGCG TCGGCGAGGT CACGGCGCTG GCGCTCGCGC CCGATGATCC GCGTCGGGTT
GATGCGACCA TTGCGGTGGC GCCGTCGACG CCGGTTCGTC CGGACACCAA GGTCGGCTTG
GACTTTCAGG GCCTGACCGG GGTGCCGGTG GTGGCGCTCG AAGGCGGCAA GCAGCTCAGC
GGCTCGGCAA TCGCTACTAC GCTGATCGCA GAGCCGGGCG CCGGGATGAG CATGACCCAG
GCCGCCCGCG AGGCGCTACG CAAGGTCGAC AGCGTGCTCG GCGAGAACTC CGGTCCGCTG
AAGGATACCA TCTCCAACTT CAAGACGTTC TCGGAGTGGC TGGCGGGGAA GACGGAGAAG
CTCGACGGCA TCCTCGGCGG CGTCGAACGG ATGACCGGGG CGAACGAACC GGTGGTGAAG
AAGGTGGTGT ACGACCTGTC GGCCGCGACC GGCTTCCCGC CGTCGTCGCC GCCGCTCAAG
GGGCAGCTCA CCATTCCGGA GTCCAATACG GTGGTGCTGT TCGACAGCCA GAAGATGTTG
CTGGCGCCAG GGCTGGAGGT CCCGGCCTTC GCCGGCGCGC AGTGGAGCGA CAGCCTTCCG
AAGATGCTGC AGGAAAAGCT GATCCAGAGC TTCGAAAATT ACGACATCGC CCACGCCCCG
ATGCGCCCGA ACGATGCCGT GCAGCCGGAC TACCAGTTGC TGACCGACAT CAGGAGTTTC
CAGGTAATCG GCGAGGGTGA TGCTCTTCGC GCCGAGATCG CATTCAGCGC CAAGATCATC
GACAAGGACG GCAAGCTGGT CGCCGCGAGG CTGTTTCAGC AAGCGTCGCC GCTCGACAAA
CCGGAGCCGG CTGCGGCGGT CAGTGCGTTC GACAAGTCAT TCGATACCAT CGCCAAGGAG
CTGGTGCCCT GGGCGGCGCA GGCGCTGGCG TCCGGCCATG CCGAAGTCGA ACCGGCTGCG
ACGACCAGCC GACCGACTAC CGCTCCAAAG TCTTCAGGTA CGACAAAAGG TCGTTGA
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| Protein sequence | METRAPFVIV GAFVLAAIFA VFGFVFWLHN TSGVGARTSY HVQFRDPVPG LLVGAAVLFN
GIRVGEVTAL ALAPDDPRRV DATIAVAPST PVRPDTKVGL DFQGLTGVPV VALEGGKQLS
GSAIATTLIA EPGAGMSMTQ AAREALRKVD SVLGENSGPL KDTISNFKTF SEWLAGKTEK
LDGILGGVER MTGANEPVVK KVVYDLSAAT GFPPSSPPLK GQLTIPESNT VVLFDSQKML
LAPGLEVPAF AGAQWSDSLP KMLQEKLIQS FENYDIAHAP MRPNDAVQPD YQLLTDIRSF
QVIGEGDALR AEIAFSAKII DKDGKLVAAR LFQQASPLDK PEPAAAVSAF DKSFDTIAKE
LVPWAAQALA SGHAEVEPAA TTSRPTTAPK SSGTTKGR
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